[R] Failed to install RQuantLib in Ubuntu machine
Joshua Ulrich
jo@h@m@ulrich @ending from gm@il@com
Thu Jan 3 12:54:03 CET 2019
The easiest way to install RQuantLib on Ubuntu is to use the
pre-compiled binaries from Michael Rutter's PPA. See the instructions
here: https://cran.r-project.org/bin/linux/ubuntu/README.html.
You will want to install the r-cran-rquantlib package after you've
added the PPA to your sources list.
Also note that the instructions say, "The best place to report
problems with these packages or ask R questions specific to Ubuntu is
the R-SIG-Debian mailing list." So you should get better/faster help
if you post there instead of this general mailing list.
Best,
Josh
On Wed, Jan 2, 2019 at 3:47 PM Christofer Bogaso
<bogaso.christofer using gmail.com> wrote:
>
> Hi,
>
> I was trying to install RQuantLib in my Ubuntu machine which failed with
> below information :
>
> *> install.packages('RQuantLib', INSTALL_opts = c('--no-lock'))*
>
> *Installing package into ‘/usr/local/lib/R/site-library’*
>
> *(as ‘lib’ is unspecified)*
>
> *trying URL 'https://cloud.r-project.org/src/contrib/RQuantLib_0.4.7.tar.gz
> <https://cloud.r-project.org/src/contrib/RQuantLib_0.4.7.tar.gz>'*
>
> *Content type 'application/x-gzip' length 189726 bytes (185 KB)*
>
> *==================================================*
>
> *downloaded 185 KB*
>
>
> ** installing *source* package ‘RQuantLib’ ...*
>
> *** package ‘RQuantLib’ successfully unpacked and MD5 sums checked*
>
> *checking whether the C++ compiler works... yes*
>
> *checking for C++ compiler default output file name... a.out*
>
> *checking for suffix of executables... *
>
> *checking whether we are cross compiling... no*
>
> *checking for suffix of object files... o*
>
> *checking whether we are using the GNU C++ compiler... yes*
>
> *checking whether g++ accepts -g... yes*
>
> *checking how to run the C++ preprocessor... g++ -E*
>
> *checking whether we are using the GNU C++ compiler... (cached) yes*
>
> *checking whether g++ accepts -g... (cached) yes*
>
> *checking for R... yes*
>
> *checking for quantlib-config... yes*
>
> *checking for Boost development files... yes*
>
> *checking for minimal Boost version... yes*
>
> *configure: creating ./config.status*
>
> *config.status: creating src/Makevars*
>
> *Completed configuration and ready to build.*
>
> *** libs*
>
> *g++ -std=gnu++11 -I/usr/share/R/include -DNDEBUG
> -I"/usr/local/lib/R/site-library/Rcpp/include" -g -O2
> -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time
> -D_FORTIFY_SOURCE=2 -g -I/usr/local/include -fpermissive -I../inst/include
> -I. -DBOOST_NO_AUTO_PTR -fopenmp -fpic -g -O2 -fstack-protector-strong
> -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c
> RcppExports.cpp -o RcppExports.o*
>
> *g++ -std=gnu++11 -I/usr/share/R/include -DNDEBUG
> -I"/usr/local/lib/R/site-library/Rcpp/include" -g -O2
> -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time
> -D_FORTIFY_SOURCE=2 -g -I/usr/local/include -fpermissive -I../inst/include
> -I. -DBOOST_NO_AUTO_PTR -fopenmp -fpic -g -O2 -fstack-protector-strong
> -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c
> affine.cpp -o affine.o*
>
> *g++ -std=gnu++11 -I/usr/share/R/include -DNDEBUG
> -I"/usr/local/lib/R/site-library/Rcpp/include" -g -O2
> -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time
> -D_FORTIFY_SOURCE=2 -g -I/usr/local/include -fpermissive -I../inst/include
> -I. -DBOOST_NO_AUTO_PTR -fopenmp -fpic -g -O2 -fstack-protector-strong
> -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c
> asian.cpp -o asian.o*
>
> *g++ -std=gnu++11 -I/usr/share/R/include -DNDEBUG
> -I"/usr/local/lib/R/site-library/Rcpp/include" -g -O2
> -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time
> -D_FORTIFY_SOURCE=2 -g -I/usr/local/include -fpermissive -I../inst/include
> -I. -DBOOST_NO_AUTO_PTR -fopenmp -fpic -g -O2 -fstack-protector-strong
> -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c
> barrier_binary.cpp -o barrier_binary.o*
>
> *g++ -std=gnu++11 -I/usr/share/R/include -DNDEBUG
> -I"/usr/local/lib/R/site-library/Rcpp/include" -g -O2
> -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time
> -D_FORTIFY_SOURCE=2 -g -I/usr/local/include -fpermissive -I../inst/include
> -I. -DBOOST_NO_AUTO_PTR -fopenmp -fpic -g -O2 -fstack-protector-strong
> -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c
> bermudan.cpp -o bermudan.o*
>
> *g++ -std=gnu++11 -I/usr/share/R/include -DNDEBUG
> -I"/usr/local/lib/R/site-library/Rcpp/include" -g -O2
> -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time
> -D_FORTIFY_SOURCE=2 -g -I/usr/local/include -fpermissive -I../inst/include
> -I. -DBOOST_NO_AUTO_PTR -fopenmp -fpic -g -O2 -fstack-protector-strong
> -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c
> bonds.cpp -o bonds.o*
>
> *g++ -std=gnu++11 -I/usr/share/R/include -DNDEBUG
> -I"/usr/local/lib/R/site-library/Rcpp/include" -g -O2
> -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time
> -D_FORTIFY_SOURCE=2 -g -I/usr/local/include -fpermissive -I../inst/include
> -I. -DBOOST_NO_AUTO_PTR -fopenmp -fpic -g -O2 -fstack-protector-strong
> -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c
> calendars.cpp -o calendars.o*
>
> *g++ -std=gnu++11 -I/usr/share/R/include -DNDEBUG
> -I"/usr/local/lib/R/site-library/Rcpp/include" -g -O2
> -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time
> -D_FORTIFY_SOURCE=2 -g -I/usr/local/include -fpermissive -I../inst/include
> -I. -DBOOST_NO_AUTO_PTR -fopenmp -fpic -g -O2 -fstack-protector-strong
> -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c
> curves.cpp -o curves.o*
>
> *g++ -std=gnu++11 -I/usr/share/R/include -DNDEBUG
> -I"/usr/local/lib/R/site-library/Rcpp/include" -g -O2
> -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time
> -D_FORTIFY_SOURCE=2 -g -I/usr/local/include -fpermissive -I../inst/include
> -I. -DBOOST_NO_AUTO_PTR -fopenmp -fpic -g -O2 -fstack-protector-strong
> -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c
> dates.cpp -o dates.o*
>
> *g++ -std=gnu++11 -I/usr/share/R/include -DNDEBUG
> -I"/usr/local/lib/R/site-library/Rcpp/include" -g -O2
> -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time
> -D_FORTIFY_SOURCE=2 -g -I/usr/local/include -fpermissive -I../inst/include
> -I. -DBOOST_NO_AUTO_PTR -fopenmp -fpic -g -O2 -fstack-protector-strong
> -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c
> daycounter.cpp -o daycounter.o*
>
> *g++ -std=gnu++11 -I/usr/share/R/include -DNDEBUG
> -I"/usr/local/lib/R/site-library/Rcpp/include" -g -O2
> -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time
> -D_FORTIFY_SOURCE=2 -g -I/usr/local/include -fpermissive -I../inst/include
> -I. -DBOOST_NO_AUTO_PTR -fopenmp -fpic -g -O2 -fstack-protector-strong
> -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c
> discount.cpp -o discount.o*
>
> *g++ -std=gnu++11 -I/usr/share/R/include -DNDEBUG
> -I"/usr/local/lib/R/site-library/Rcpp/include" -g -O2
> -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time
> -D_FORTIFY_SOURCE=2 -g -I/usr/local/include -fpermissive -I../inst/include
> -I. -DBOOST_NO_AUTO_PTR -fopenmp -fpic -g -O2 -fstack-protector-strong
> -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c
> hullwhite.cpp -o hullwhite.o*
>
> *g++ -std=gnu++11 -I/usr/share/R/include -DNDEBUG
> -I"/usr/local/lib/R/site-library/Rcpp/include" -g -O2
> -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time
> -D_FORTIFY_SOURCE=2 -g -I/usr/local/include -fpermissive -I../inst/include
> -I. -DBOOST_NO_AUTO_PTR -fopenmp -fpic -g -O2 -fstack-protector-strong
> -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c
> implieds.cpp -o implieds.o*
>
> *g++ -std=gnu++11 -I/usr/share/R/include -DNDEBUG
> -I"/usr/local/lib/R/site-library/Rcpp/include" -g -O2
> -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time
> -D_FORTIFY_SOURCE=2 -g -I/usr/local/include -fpermissive -I../inst/include
> -I. -DBOOST_NO_AUTO_PTR -fopenmp -fpic -g -O2 -fstack-protector-strong
> -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c
> modules.cpp -o modules.o*
>
> *g++ -std=gnu++11 -I/usr/share/R/include -DNDEBUG
> -I"/usr/local/lib/R/site-library/Rcpp/include" -g -O2
> -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time
> -D_FORTIFY_SOURCE=2 -g -I/usr/local/include -fpermissive -I../inst/include
> -I. -DBOOST_NO_AUTO_PTR -fopenmp -fpic -g -O2 -fstack-protector-strong
> -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c
> sabr.cpp -o sabr.o*
>
> *g++ -std=gnu++11 -I/usr/share/R/include -DNDEBUG
> -I"/usr/local/lib/R/site-library/Rcpp/include" -g -O2
> -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time
> -D_FORTIFY_SOURCE=2 -g -I/usr/local/include -fpermissive -I../inst/include
> -I. -DBOOST_NO_AUTO_PTR -fopenmp -fpic -g -O2 -fstack-protector-strong
> -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c
> schedule.cpp -o schedule.o*
>
> *g++ -std=gnu++11 -I/usr/share/R/include -DNDEBUG
> -I"/usr/local/lib/R/site-library/Rcpp/include" -g -O2
> -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time
> -D_FORTIFY_SOURCE=2 -g -I/usr/local/include -fpermissive -I../inst/include
> -I. -DBOOST_NO_AUTO_PTR -fopenmp -fpic -g -O2 -fstack-protector-strong
> -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c
> utils.cpp -o utils.o*
>
> *g++ -std=gnu++11 -I/usr/share/R/include -DNDEBUG
> -I"/usr/local/lib/R/site-library/Rcpp/include" -g -O2
> -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time
> -D_FORTIFY_SOURCE=2 -g -I/usr/local/include -fpermissive -I../inst/include
> -I. -DBOOST_NO_AUTO_PTR -fopenmp -fpic -g -O2 -fstack-protector-strong
> -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c
> vanilla.cpp -o vanilla.o*
>
> *g++ -std=gnu++11 -I/usr/share/R/include -DNDEBUG
> -I"/usr/local/lib/R/site-library/Rcpp/include" -g -O2
> -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time
> -D_FORTIFY_SOURCE=2 -g -I/usr/local/include -fpermissive -I../inst/include
> -I. -DBOOST_NO_AUTO_PTR -fopenmp -fpic -g -O2 -fstack-protector-strong
> -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c
> zero.cpp -o zero.o*
>
> *g++ -std=gnu++11 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions
> -Wl,-z,relro -o RQuantLib.so RcppExports.o affine.o asian.o
> barrier_binary.o bermudan.o bonds.o calendars.o curves.o dates.o
> daycounter.o discount.o hullwhite.o implieds.o modules.o sabr.o schedule.o
> utils.o vanilla.o zero.o -L/usr/local/lib -lQuantLib -fopenmp
> -L/usr/lib/R/lib -lR*
>
> *installing to /usr/local/lib/R/site-library/RQuantLib/libs*
>
> *** R*
>
> *** data*
>
> *** demo*
>
> *** inst*
>
> *** preparing package for lazy loading*
>
> *** help*
>
> **** installing help indices*
>
> *** building package indices*
>
> *** testing if installed package can be loaded*
>
>
> * *** caught segfault ****
>
> *address 0x7f57dba1d9a0, cause 'invalid permissions'*
>
>
> *Traceback:*
>
> * 1: dyn.load(file, DLLpath = DLLpath, ...)*
>
> * 2: library.dynam(lib, package, package.lib)*
>
> * 3: loadNamespace(package, lib.loc)*
>
> * 4: doTryCatch(return(expr), name, parentenv, handler)*
>
> * 5: tryCatchOne(expr, names, parentenv, handlers[[1L]])*
>
> * 6: tryCatchList(expr, classes, parentenv, handlers)*
>
> * 7: tryCatch({ attr(package, "LibPath") <- which.lib.loc ns <-
> loadNamespace(package, lib.loc) env <- attachNamespace(ns, pos = pos,
> deps)}, error = function(e) { P <- if (!is.null(cc <- conditionCall(e)))
> paste(" in", deparse(cc)[1L]) else "" msg <-
> gettextf("package or namespace load failed for %s%s:\n %s",
> sQuote(package), P, conditionMessage(e)) if (logical.return)
> message(paste("Error:", msg), domain = NA) else stop(msg, call. = FALSE,
> domain = NA)})*
>
> * 8: library(pkg_name, lib.loc = lib, character.only = TRUE, logical.return
> = TRUE)*
>
> * 9: withCallingHandlers(expr, packageStartupMessage = function(c)
> invokeRestart("muffleMessage"))*
>
> *10: suppressPackageStartupMessages(library(pkg_name, lib.loc = lib,
> character.only = TRUE, logical.return = TRUE))*
>
> *11: doTryCatch(return(expr), name, parentenv, handler)*
>
> *12: tryCatchOne(expr, names, parentenv, handlers[[1L]])*
>
> *13: tryCatchList(expr, classes, parentenv, handlers)*
>
> *14: tryCatch(expr, error = function(e) { call <- conditionCall(e) if
> (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch)))
> call <- sys.call(-4L) dcall <- deparse(call)[1L]
> prefix <- paste("Error in", dcall, ": ") LONG <- 75L msg <-
> conditionMessage(e) sm <- strsplit(msg, "\n")[[1L]] w <- 14L
> + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na
> <http://is.na>(w)) w <- 14L + nchar(dcall, type = "b") +
> nchar(sm[1L], type = "b") if (w > LONG)
> prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg
> <- paste0(prefix, conditionMessage(e), "\n")
> .Internal(seterrmessage(msg[1L])) if (!silent &&
> identical(getOption("show.error.messages"), TRUE)) {
> cat(msg, file = outFile) .Internal(printDeferredWarnings()) }
> invisible(structure(msg, class = "try-error", condition = e))})*
>
> *15: try(suppressPackageStartupMessages(library(pkg_name, lib.loc = lib,
> character.only = TRUE, logical.return = TRUE)))*
>
> *16: tools:::.test_load_package("RQuantLib",
> "/usr/local/lib/R/site-library")*
>
> *An irrecoverable exception occurred. R is aborting now ...*
>
> *Segmentation fault (core dumped)*
>
> *ERROR: loading failed*
>
> ** removing ‘/usr/local/lib/R/site-library/RQuantLib’*
>
>
> *The downloaded source packages are in*
>
> * ‘/tmp/RtmpPvzBa6/downloaded_packages’*
>
> *Warning message:*
>
> *In install.packages("RQuantLib", INSTALL_opts = c("--no-lock")) :*
>
> * installation of package ‘RQuantLib’ had non-zero exit status*
>
>
> * Below is my SessionInfo :*
>
>
> > sessionInfo()
>
> R version 3.4.4 (2018-03-15)
>
> Platform: x86_64-pc-linux-gnu (64-bit)
>
> Running under: Ubuntu 16.04.4 LTS
>
>
> Matrix products: default
>
> BLAS: /usr/lib/libblas/libblas.so.3.6.0
>
> LAPACK: /usr/lib/lapack/liblapack.so.3.6.0
>
>
> locale:
>
> [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
>
> [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
>
> [5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
>
> [7] LC_PAPER=en_US.UTF-8 LC_NAME=C
>
> [9] LC_ADDRESS=C LC_TELEPHONE=C
>
> [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
>
>
> attached base packages:
>
> [1] stats graphics grDevices utils datasets methods base
>
>
> loaded via a namespace (and not attached):
>
> [1] compiler_3.4.4 tools_3.4.4
>
>
> Any help will be highly appreciated. Thank,
>
> [[alternative HTML version deleted]]
>
> ______________________________________________
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--
Joshua Ulrich | about.me/joshuaulrich
FOSS Trading | www.fosstrading.com
R/Finance 2018 | www.rinfinance.com
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