[R] Use probesets with highest baseline expression for differntial gene expression in LIMMA

[Martin Morgan]

On 02/20/2012 08:35 PM, ejm0091 wrote:
> Hello All,
> I am relatively new to R. I would like to know if there is a way to alter
> LIMMA defualt options such that the package instead of averaging signal
> intensities of probesets selects the probesets with highest baseline
> expression/highest signal intensity?
>
> Any help would be greatly appreciated.

Hi,

Please ask on the Bioconductor mailing list.

http://bioconductor.org/help/mailing-list/

Provide more information, e.g., about the chip that you are using, and 
the work flow that you have tried. Please provide the output of the 
command sessionInfo().

Martin

> Many Thanks.
>
> Ekta Jain
>
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>
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