[BioC] DESeq package error

Dan Tenenbaum dtenenba at fhcrc.org
Wed Jan 9 16:57:28 CET 2013


On Wed, Jan 9, 2013 at 7:42 AM, Fares Z. Najar, Ph.D. <fznajar at ou.edu> wrote:
> Hi all,
>
> I am trying to install DESeq package.  According to the website instructions
> ("http://bioconductor.org/packages/2.11/bioc/html/DESeq.html")S. tarting
> from "R", I get the message:
>
> Warning message:
> In getDependencies(pkgs, dependencies, available, lib) :
>    package 'DESeq' is not available
>
> Was there something I should have done before?
>


Can you post
1) The commands you are tying that cause the error.
2) The output of sessionInfo()
3) The output of biocinstallRepos()

Thanks,
Dan


> Best,
> Fares
>
> --
> -----------------------------------------------
> Fares Z. Najar, Ph.D.
> Research Scientist
> Chemistry and Biochemistry
> Advanced Center for Genome Technology (ACGT)
> Stephenson Research and Technology Center
> 101 David L. Boren Blvd. Room 2170
> Norman, OK 73019
>
> Phone: 405-325-4912
> Fax:   405-325-7762
> E-mail: fznajar at ou.edu
>
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