[BioC] Balanced Block design in LIMMA

Gordon K Smyth smyth at wehi.EDU.AU
Sun Sep 28 04:26:53 CEST 2008


Two small corrections:

   Treated <- rep(c(1,-1),5)
   design <- cbind(Dye=1,Treated=Treated)
   fit <- lmFit(MA, design)
   fit <- eBayes(fit)
   topTable(fit, coef="Treated")

Gordon



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