[BioC] Preprocessing affymetrix array data
Steve Lianoglou
mailinglist.honeypot at gmail.com
Tue Sep 23 18:06:30 CEST 2008
Hi,
On Sep 23, 2008, at 8:21 AM, Abdi Ali wrote:
> Hi,
>
> I am a new user of bioconductor package to conduct my gemonic data
> of gene
> expression using affymetrix array data. what is the best approach
> and easy
> way to get started?
In addition to what Sean said, the Primer vignette in the affy library
is very helpful. After you install the base bioconductor packages, you
just:
R> library(affy)
R> openVignette()
R> Select the number that corresponds to "affy - Primer"
HTH,
-steve
--
Steve Lianoglou
Graduate Student: Physiology, Biophysics and Systems Biology
Weill Cornell Medical College of Cornell University
http://cbio.mskcc.org/~lianos
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