[BioC] compiler for R running bioconductor

[STKH (Steen Krogsgaard)]

Hi,

I have used tinn-R (http://www.sciviews.org/Tinn-R/) but that's mainly an editor, not much debugging. But have a look.

Cheers
Steen

-----Original Message-----
From: bioconductor-bounces at stat.math.ethz.ch [mailto:bioconductor-bounces at stat.math.ethz.ch] On Behalf Of Ruppert Valentino
Sent: 10. september 2008 12:04
To: BioC
Subject: Re: [BioC] compiler for R running bioconductor


Hello Sean,
                     I was asking if there are good Integrated Development Environment for R, or even possibly a native compiler that can compile R code into executable. As in Java, it is interepreted language but there are few native compilers for it and there are many good IDE. Are there similar things for R? if so where can I find them?

Many Thanks.

Ruppert


> Date: Tue, 9 Sep 2008 17:33:43 -0400
> From: sdavis2 at mail.nih.gov
> To: ruppert7 at hotmail.com
> Subject: Re: [BioC] compiler for R running bioconductor
> CC: bioconductor at stat.math.ethz.ch
>
> On Tue, Sep 9, 2008 at 5:06 PM, Ruppert Valentino  wrote:
>>
>> Hello,
>>
>> Does anyone know of a decent compiler for R either public domain or commercial that one can use to trace values in a program. I can use cat and trace ..etc but it would be nice to have a visual indicator like in Borland or Microsoft compilers.
>>
>> Most of us write long and complicated programs in R and sometimes tracing through them helps to show the semantic errors so if anyone know of a decent compiler for R it would be great.
>>
>
> See here:
>
> http://www.stats.uwo.ca/faculty/murdoch/software/debuggingR/
>
> R is interpreted, so I'm not sure what you mean by "compiler". If you
> mean Development Environment, I don't have a good answer for you.
>
> Sean

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