[R] my R code worked well when running the first 1000 lines of R code

Yuan Chun Ding ycd|ng @end|ng |rom coh@org
Wed Jun 12 18:28:29 CEST 2024


Hi R users,

The following code worked well to summarize four data groups in a dataframe for three variables (t_depth, t_alt_count, t_alt_ratio), 12 columns of summary, see attached.
However, after running another 2000 lines of R codes using functions from more than 10 other R  libraries, then it only generated one column of summary.
Do you know why?

Thank you,

Yuan Chun Ding

summary_anno1148ft <- anno1148ft %>%
  pivot_longer(c(t_depth, t_alt_count, t_alt_ratio), names_to = "measure") %>%
  group_by(dat, measure) %>%
  summarize(minimum = min(value,na.rm=T),
            q25 = quantile(value, probs = 0.25,na.rm=T),
            med = median(value,na.rm=T),
            q75 = quantile(value, probs = 0.75,na.rm=T),
            maximum = max(value,na.rm=T),
            average = mean(value,na.rm=T),
            #standard_deviation = sd(value),
            .groups = "drop"
  )
summary_anno1148ft <-t(summary_anno1148ft)



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