[R] Overlapping subject-specific histograms

PIKAL Petr petr.pikal at precheza.cz
Thu Jan 14 13:03:16 CET 2016


Hi

change

points( factor(names(tab)) + dist.overlap, data$sim[kat == i] ,
> type="h", col=2, lw =4)

to

points( 1:length(data$count[kat == i]) + dist.overlap, data$sims[kat == i] , type="h", col=2, lw =4)

And do not use html post, your code could be scrammbled.

Cheers
Petr


> -----Original Message-----
> From: R-help [mailto:r-help-bounces at r-project.org] On Behalf Of Frank
> S.
> Sent: Thursday, January 14, 2016 12:48 PM
> To: r-help at r-project.org
> Subject: [R] Overlapping subject-specific histograms
>
> Dear R users,
>
> First of all, excuse me if my doubt is very trivial, but so far I
> haven't been able to solve it.
> My question is this: I have a data frame which contains repeated
> measurements on 4 subjects coded
> as "id", and I want to plot, for each subject, not only the
> corresponding "counts" variable histogram,
> but also overlapping to the right side the corresponding results of
> "sim" variable (I want to do it in basic
> R code, i.e., without any specific R package). I have almost the right
> code (see the example code below),
> but I can not overlap the "sim" variable.
>
> Thanks in advance for suggestions!!
>
> Frank
>
> data <- data.frame(id =  rep(c(1,3,4,7), c(9,5,3,3)),
>     count = c(0, 10, 15, 0, 16, 7, 14, 11, 12, 1, 8, 17, 19, 0, 9, 10,
> 14, 2, 3, 10),
>     sims =  c(1, 9, 15, 1, 14, 5, 12, 10, 12, 2, 6, 15, 18, 1, 9, 9,
> 12, 5, 3, 9))
>
> # The actual code I have
> # ------------------------------
> windows(height = 5, width = 5)
> par(mfrow = c(2, 2), oma = c(1, 2, 2, 1), mar=c(3, 2, 1, 1), las = 1)
> for(i in 1:length(unique(data$id))){
>    kat <- factor(data$id, labels = 1:length(unique(data$id)))
>    plot(data$count[kat == i],
>    type = "h", col = 1, lwd = 3, xaxt = "n", xlab ="", main = "",
>    xlim = c(1, max(table(data$id))), ylim = c(0, 20))
>    axis(1, at = 1:max(table(data$id)))
>    mtext( bquote(paste("id = ", .(unique(data$id)[i]))), side = 3, cex
> = 0.9, line = 0.5)
>    tab <- table( as.matrix( data$id ) )
>    dist.overlap <- 0.4 # Distance of right overlapping of the "sim"
> variable
>    # points( factor(names(tab)) + dist.overlap, data$sim[kat == i] ,
> type="h", col=2, lw =4)  ##  =======>  Line I can not solve
>  }
>
>       [[alternative HTML version deleted]]
>
> ______________________________________________
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> PLEASE do read the posting guide http://www.R-project.org/posting-
> guide.html
> and provide commented, minimal, self-contained, reproducible code.

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