[R] FD package
Fabio Monteiro
fabio.monteiro1992 at gmail.com
Mon Feb 22 17:47:47 CET 2016
> hist(data$FRic)
Error in data$FRic : object of type 'closure' is not subsettable
2016-02-22 14:10 GMT+00:00 stephen sefick <ssefick at gmail.com>:
> Please see ?dput. What you provided is not a minimal, reproducible example
> (i.e., there is no R code).
>
> What kind of plot are you trying to plot? hist(data$FRic) will plot your
> data. I guess we need more information to be helpful.
>
>
> On Mon, Feb 22, 2016 at 8:03 AM, Fabio Monteiro <
> fabio.monteiro1992 at gmail.com> wrote:
>
>> This is the output.
>>
>> I want to plot, for example FRic
>>
>> $nbsp
>> com1 com2 com3 com4 com5 com6 com7 com8 com9 com10 com11 com12
>> com13 com14 com15 com16
>> 17 21 18 12 15 20 16 12 18 15 18 16
>> 10 11 17 20
>> com17 com18 com19 com20 com21 com22 com23 com24 com25 com26 com27 com28
>> com29 com30 com31 com32
>> 9 13 11 10 11 15 12 16 18 18 11 19
>> 12 13 13 12
>> com33 com34 com35 com36 com37 com38 com39 com40 com41 com42 com43 com44
>> com45 com46 com47 com48
>> 15 11 15 8 7 12 10 9 12 15 13 13
>> 15 13 10 16
>> com49 com50 com51 com52 com53 com54 com55 com56 com57 com58 com59 com60
>> com61 com62 com63 com64
>> 14 12 14 13 14 13 15 13 11 12 16 13
>> 9 8 11 15
>> com65 com66 com67 com68 com69 com70 com71 com72 com73 com74 com75 com76
>> com77 com78 com79 com80
>> 13 18 13 15 10 11 12 11 14 8 10 12
>> 11 12 14 13
>> com81 com82
>> 9 12
>>
>> $sing.sp
>> com1 com2 com3 com4 com5 com6 com7 com8 com9 com10 com11 com12
>> com13 com14 com15 com16
>> 17 21 18 12 15 20 16 12 18 15 18 16
>> 10 11 17 20
>> com17 com18 com19 com20 com21 com22 com23 com24 com25 com26 com27 com28
>> com29 com30 com31 com32
>> 9 13 11 10 11 15 12 16 18 18 11 19
>> 12 13 13 12
>> com33 com34 com35 com36 com37 com38 com39 com40 com41 com42 com43 com44
>> com45 com46 com47 com48
>> 14 11 15 8 7 12 10 9 12 15 13 13
>> 15 13 10 16
>> com49 com50 com51 com52 com53 com54 com55 com56 com57 com58 com59 com60
>> com61 com62 com63 com64
>> 14 12 13 13 14 13 15 13 11 12 16 13
>> 9 8 11 15
>> com65 com66 com67 com68 com69 com70 com71 com72 com73 com74 com75 com76
>> com77 com78 com79 com80
>> 13 17 13 15 10 11 12 11 14 8 10 12
>> 11 12 14 13
>> com81 com82
>> 9 12
>>
>> $FRic
>> com1 com2 com3 com4 com5
>> com6 com7
>> 3.669752e-04 6.898164e-04 6.893918e-04 3.935451e-05 1.436140e-04
>> 1.012949e-03 2.934536e-04
>> com8 com9 com10 com11 com12
>> com13 com14
>> 1.001556e-04 6.425547e-04 1.740235e-04 5.561802e-04 2.964362e-04
>> 1.480860e-05 1.060512e-04
>> com15 com16 com17 com18 com19
>> com20 com21
>> 4.121157e-04 5.346433e-04 1.108007e-06 5.726895e-05 8.593435e-06
>> 1.452446e-05 1.855957e-05
>> com22 com23 com24 com25 com26
>> com27 com28
>> 2.128971e-04 8.438329e-05 3.216279e-04 2.529525e-04 4.980317e-04
>> 3.111325e-05 6.290088e-04
>> com29 com30 com31 com32 com33
>> com34 com35
>> 3.559802e-05 5.907167e-05 8.906878e-05 2.510168e-05 1.929088e-04
>> 1.234508e-04 2.784301e-04
>> com36 com37 com38 com39 com40
>> com41 com42
>> 1.480560e-08 1.411752e-06 5.576549e-05 2.445569e-05 6.167242e-06
>> 1.210002e-04 1.666034e-04
>> com43 com44 com45 com46 com47
>> com48 com49
>> 1.203484e-04 7.347513e-05 8.991003e-05 8.691148e-05 6.718789e-05
>> 1.357136e-04 1.821851e-04
>> com50 com51 com52 com53 com54
>> com55 com56
>> 4.832203e-05 8.391627e-05 2.173971e-04 1.355160e-04 1.304425e-04
>> 1.787888e-04 1.759204e-05
>> com57 com58 com59 com60 com61
>> com62 com63
>> 9.307474e-05 1.185857e-04 2.776166e-04 1.277143e-04 5.905299e-06
>> 9.606009e-08 1.019480e-04
>> com64 com65 com66 com67 com68
>> com69 com70
>> 2.395355e-04 2.307081e-04 4.019309e-04 6.874506e-05 1.417622e-04
>> 5.675463e-06 9.878848e-05
>> com71 com72 com73 com74 com75
>> com76 com77
>> 6.907251e-05 8.938528e-05 2.493585e-04 1.214151e-09 2.419942e-05
>> 1.183863e-04 7.457464e-05
>> com78 com79 com80 com81 com82
>> 6.284563e-05 1.741100e-04 2.128749e-04 2.920847e-06 9.368270e-05
>>
>> $qual.FRic
>> [1] 0.7035642
>>
>> $FEve
>> com1 com2 com3 com4 com5 com6 com7
>> com8 com9
>> 0.2388515 0.3996566 0.3350494 0.2943431 0.3576785 0.3846561 0.4319967
>> 0.5857688 0.4271764
>> com10 com11 com12 com13 com14 com15 com16
>> com17 com18
>> 0.3288544 0.4625139 0.4810921 0.3041395 0.5820621 0.6313595 0.5406627
>> 0.2707035 0.4530424
>> com19 com20 com21 com22 com23 com24 com25
>> com26 com27
>> 0.3015171 0.5790744 0.7253301 0.5441404 0.4481694 0.6187607 0.5445650
>> 0.4955940 0.5116752
>> com28 com29 com30 com31 com32 com33 com34
>> com35 com36
>> 0.5221560 0.5670513 0.4293040 0.4812907 0.4915317 0.3878949 0.4287726
>> 0.2893205 0.5835605
>> com37 com38 com39 com40 com41 com42 com43
>> com44 com45
>> 0.7896749 0.5482274 0.4015703 0.5990018 0.5431955 0.6251919 0.6023954
>> 0.4962892 0.3749658
>> com46 com47 com48 com49 com50 com51 com52
>> com53 com54
>> 0.4290664 0.4932756 0.5870607 0.3415984 0.3242199 0.4296702 0.4971491
>> 0.3272834 0.4865427
>> com55 com56 com57 com58 com59 com60 com61
>> com62 com63
>> 0.3428716 0.4653631 0.5479140 0.5698272 0.4777804 0.4525375 0.5916255
>> 0.4652363 0.4111973
>> com64 com65 com66 com67 com68 com69 com70
>> com71 com72
>> 0.3987632 0.3856989 0.3064660 0.4717288 0.3534531 0.4285679 0.6087836
>> 0.3607790 0.5494437
>> com73 com74 com75 com76 com77 com78 com79
>> com80 com81
>> 0.4214327 0.4360703 0.3808632 0.2833824 0.2876808 0.3380949 0.3421757
>> 0.2249389 0.6562824
>> com82
>> 0.6041267
>>
>> $FDiv
>> com1 com2 com3 com4 com5 com6 com7
>> com8 com9
>> 0.7423817 0.7458169 0.8679783 0.8226750 0.8373889 0.7877725 0.8070008
>> 0.7379254 0.8131881
>> com10 com11 com12 com13 com14 com15 com16
>> com17 com18
>> 0.7050804 0.6976598 0.7512530 0.6806472 0.6994011 0.7276620 0.7870732
>> 0.8793599 0.7562019
>> com19 com20 com21 com22 com23 com24 com25
>> com26 com27
>> 0.8983302 0.7681038 0.8163501 0.8198178 0.8489976 0.8922742 0.8442970
>> 0.8269863 0.7891795
>> com28 com29 com30 com31 com32 com33 com34
>> com35 com36
>> 0.7569559 0.8674167 0.7436638 0.7317634 0.9541561 0.7466859 0.7087626
>> 0.8006321 0.8511148
>> com37 com38 com39 com40 com41 com42 com43
>> com44 com45
>> 0.7729260 0.7509163 0.6905947 0.8466404 0.7677596 0.8791198 0.8211045
>> 0.7259760 0.7992553
>> com46 com47 com48 com49 com50 com51 com52
>> com53 com54
>> 0.7573869 0.8788377 0.9036087 0.8287276 0.7762280 0.8064715 0.7775368
>> 0.7828276 0.8151245
>> com55 com56 com57 com58 com59 com60 com61
>> com62 com63
>> 0.7503195 0.9213640 0.9141396 0.9150055 0.8348691 0.7271261 0.7875414
>> 0.8338675 0.7070272
>> com64 com65 com66 com67 com68 com69 com70
>> com71 com72
>> 0.7189990 0.7043998 0.7768710 0.7264939 0.8140790 0.7532290 0.7309884
>> 0.9190267 0.8540992
>> com73 com74 com75 com76 com77 com78 com79
>> com80 com81
>> 0.7531779 0.8520790 0.7649957 0.7319195 0.7578687 0.7915857 0.7600834
>> 0.7303097 0.7693079
>> com82
>> 0.7487281
>>
>> $FDis
>> com1 com2 com3 com4 com5 com6
>> com7 com8
>> 0.19178600 0.15352983 0.23419296 0.20315128 0.18604639 0.14348855
>> 0.28989249 0.25752544
>> com9 com10 com11 com12 com13 com14
>> com15 com16
>> 0.26174957 0.15962395 0.17907612 0.19642851 0.12827329 0.20114316
>> 0.18128942 0.25731184
>> com17 com18 com19 com20 com21 com22
>> com23 com24
>> 0.25855225 0.19576353 0.26366092 0.27728602 0.29546846 0.20720052
>> 0.27212077 0.30880887
>> com25 com26 com27 com28 com29 com30
>> com31 com32
>> 0.29440458 0.25396646 0.25647806 0.23422171 0.25464177 0.24311894
>> 0.16182038 0.09958014
>> com33 com34 com35 com36 com37 com38
>> com39 com40
>> 0.13095167 0.12983413 0.24224903 0.18239337 0.19817113 0.26320996
>> 0.11766508 0.30940641
>> com41 com42 com43 com44 com45 com46
>> com47 com48
>> 0.23583814 0.30624876 0.27750572 0.16747032 0.21445188 0.24327116
>> 0.20589103 0.27339261
>> com49 com50 com51 com52 com53 com54
>> com55 com56
>> 0.23614656 0.23678552 0.25641929 0.26260242 0.22516659 0.25243952
>> 0.23674896 0.18732040
>> com57 com58 com59 com60 com61 com62
>> com63 com64
>> 0.27202483 0.22947018 0.31342777 0.17997456 0.18461335 0.32429534
>> 0.14840674 0.13731830
>> com65 com66 com67 com68 com69 com70
>> com71 com72
>> 0.20437128 0.23298402 0.14830718 0.27194825 0.09289396 0.23196338
>> 0.17920946 0.25265696
>> com73 com74 com75 com76 com77 com78
>> com79 com80
>> 0.23525249 0.22171523 0.21972879 0.23523622 0.25336830 0.22477734
>> 0.20430806 0.20674064
>> com81 com82
>> 0.14270928 0.22673005
>>
>> $RaoQ
>> com1 com2 com3 com4 com5 com6
>> com7 com8
>> 0.05331536 0.03630438 0.07372825 0.06071274 0.05671961 0.05128404
>> 0.10541586 0.08965742
>> com9 com10 com11 com12 com13 com14
>> com15 com16
>> 0.09102682 0.04333067 0.04941515 0.05495308 0.03115535 0.06048519
>> 0.06070379 0.08680368
>> com17 com18 com19 com20 com21 com22
>> com23 com24
>> 0.07256118 0.05321952 0.08855815 0.10718949 0.10760039 0.07391960
>> 0.09163325 0.11476244
>> com25 com26 com27 com28 com29 com30
>> com31 com32
>> 0.10458183 0.08833300 0.07746703 0.07975863 0.08699710 0.07029682
>> 0.04116800 0.02091466
>> com33 com34 com35 com36 com37 com38
>> com39 com40
>> 0.03452371 0.03102533 0.07072961 0.04601163 0.05125527 0.08872861
>> 0.03608639 0.11227991
>> com41 com42 com43 com44 com45 com46
>> com47 com48
>> 0.07155343 0.10655043 0.09463142 0.04483107 0.05149290 0.06818611
>> 0.05776898 0.08787335
>> com49 com50 com51 com52 com53 com54
>> com55 com56
>> 0.06689262 0.06673575 0.07673498 0.08209786 0.06165892 0.07169030
>> 0.07207671 0.05351944
>> com57 com58 com59 com60 com61 com62
>> com63 com64
>> 0.10496706 0.07830439 0.11178032 0.05616672 0.04961674 0.11105321
>> 0.03840657 0.03693797
>> com65 com66 com67 com68 com69 com70
>> com71 com72
>> 0.05718178 0.07088485 0.03711119 0.08826702 0.02446860 0.08202483
>> 0.05274964 0.07232899
>> com73 com74 com75 com76 com77 com78
>> com79 com80
>> 0.06245748 0.05668243 0.06019524 0.07375344 0.07743079 0.06009721
>> 0.05757830 0.05642231
>> com81 com82
>> 0.03665132 0.06852237
>>
>> $CWM
>> trait1 trait2 trait3 trait4
>> trait5
>> com1 Demersal Marine, brackish, freshwater 3.361717 Invertebrate Feeder
>> Browser
>> com2 Demersal Marine, brackish, freshwater 3.391770 Invertebrate Feeder
>> Browser
>> com3 Demersal Marine, brackish, freshwater 3.389626 Invertebrate Feeder
>> Browser
>> com4 Demersal Marine, brackish, freshwater 3.437043 Invertebrate Feeder
>> Browser
>> com5 Demersal Marine, brackish, freshwater 3.450760 Invertebrate Feeder
>> Browser
>> com6 Demersal Marine, brackish, freshwater 3.354952 Invertebrate Feeder
>> Browser
>> com7 Demersal Marine, brackish, freshwater 3.389917 Invertebrate Feeder
>> Browser
>> com8 Demersal Marine, brackish, freshwater 3.382973 Invertebrate Feeder
>> Browser
>> com9 Demersal Marine, brackish, freshwater 3.371722 Invertebrate Feeder
>> Browser
>> com10 Demersal Marine, brackish, freshwater 3.371057 Invertebrate Feeder
>> Browser
>> com11 Demersal Marine, brackish, freshwater 3.389740 Invertebrate Feeder
>> Browser
>> com12 Demersal Marine, brackish, freshwater 3.416626 Invertebrate Feeder
>> Browser
>> com13 Demersal Marine, brackish, freshwater 3.348563 Invertebrate Feeder
>> Browser
>> com14 Demersal Marine, brackish, freshwater 3.310051 Invertebrate Feeder
>> Browser
>> com15 Demersal Marine, brackish, freshwater 3.274433 Invertebrate Feeder
>> Browser
>> com16 Demersal Marine, brackish, freshwater 3.366033 Invertebrate Feeder
>> Browser
>> com17 Pelagic Marine, brackish, freshwater 3.284144 Invertebrate Feeder
>> Browser/Hunter
>> com18 Demersal Marine, brackish, freshwater 3.352978 Invertebrate Feeder
>> Browser
>> com19 Demersal Marine, brackish, freshwater 3.313528 Invertebrate Feeder
>> Browser
>> com20 Demersal Marine, brackish, freshwater 3.368486 Invertebrate Feeder
>> Browser
>> com21 Demersal Marine, brackish, freshwater 3.346555 Invertebrate Feeder
>> Browser
>> com22 Demersal Marine, brackish, freshwater 3.348779 Invertebrate Feeder
>> Browser
>> com23 Demersal Marine, brackish, freshwater 3.316949 Invertebrate Feeder
>> Browser
>> com24 Demersal Marine, brackish, freshwater 3.332521 Invertebrate Feeder
>> Browser
>> com25 Demersal Marine, brackish, freshwater 3.398814 Invertebrate Feeder
>> Browser
>> com26 Demersal Marine, brackish, freshwater 3.281393 Invertebrate Feeder
>> Browser
>> com27 Demersal Marine, brackish, freshwater 3.325194 Invertebrate Feeder
>> Browser
>> com28 Demersal Marine, brackish, freshwater 3.356956 Invertebrate Feeder
>> Browser
>> com29 Demersal Marine, brackish, freshwater 3.282245 Invertebrate Feeder
>> Browser
>> com30 Demersal Marine, brackish, freshwater 3.263298 Invertebrate Feeder
>> Browser
>> com31 Demersal Marine, brackish, freshwater 3.304036 Invertebrate Feeder
>> Browser
>> com32 Demersal Marine, brackish 3.230522 Invertebrate Feeder
>> Browser
>> com33 Demersal Marine, brackish, freshwater 3.347002 Invertebrate Feeder
>> Browser
>> com34 Demersal Marine, brackish, freshwater 3.430373 Invertebrate Feeder
>> Browser
>> com35 Demersal Marine, brackish, freshwater 3.318061 Invertebrate Feeder
>> Browser
>> com36 Demersal Marine, brackish, freshwater 3.334512 Invertebrate Feeder
>> Browser
>> com37 Demersal Marine, brackish, freshwater 3.354938 Invertebrate Feeder
>> Browser
>> com38 Demersal Marine, brackish, freshwater 3.282320 Invertebrate Feeder
>> Browser
>> com39 Demersal Marine, brackish, freshwater 3.307719 Invertebrate Feeder
>> Browser
>> com40 Demersal Marine, brackish 3.343822 Invertebrate Feeder
>> Browser
>> com41 Demersal Marine, brackish, freshwater 3.347152 Invertebrate Feeder
>> Browser
>> com42 Demersal Marine, brackish, freshwater 3.389799 Invertebrate Feeder
>> Browser
>> com43 Demersal Marine, brackish, freshwater 3.400693 Invertebrate Feeder
>> Browser
>> com44 Demersal Marine, brackish, freshwater 3.421323 Invertebrate Feeder
>> Browser
>> com45 Demersal Marine, brackish, freshwater 3.329006 Invertebrate Feeder
>> Browser
>> com46 Demersal Marine, brackish, freshwater 3.316793 Invertebrate Feeder
>> Browser
>> com47 Benthic Marine, brackish, freshwater 3.309663 Invertebrate Feeder
>> Browser
>> com48 Demersal Marine, brackish, freshwater 3.372207 Invertebrate Feeder
>> Browser
>> com49 Benthic Marine, brackish, freshwater 3.332736 Invertebrate Feeder
>> Browser
>> com50 Benthic Marine, brackish, freshwater 3.311616 Invertebrate Feeder
>> Browser
>> com51 Demersal Marine, brackish, freshwater 3.319775 Invertebrate Feeder
>> Browser
>> com52 Demersal Marine, brackish, freshwater 3.277058 Invertebrate Feeder
>> Browser
>> com53 Demersal Marine, brackish, freshwater 3.354429 Invertebrate Feeder
>> Browser
>> com54 Demersal Marine, brackish, freshwater 3.339532 Invertebrate Feeder
>> Browser
>> com55 Demersal Marine, brackish, freshwater 3.357153 Invertebrate Feeder
>> Browser
>> com56 Benthic Marine, brackish, freshwater 3.279952 Invertebrate Feeder
>> Browser
>> com57 Benthic Marine, brackish 3.126602 Invertebrate Feeder
>> Browser
>> com58 Benthic Marine, brackish 3.217454 Invertebrate Feeder
>> Browser
>> com59 Demersal Marine, brackish 3.307770 Invertebrate Feeder
>> Browser
>> com60 Demersal Marine, brackish 3.252970 Invertebrate Feeder
>> Browser
>> com61 Demersal Marine, brackish, freshwater 3.404601 Invertebrate Feeder
>> Browser
>> com62 Pelagic Marine, brackish, freshwater 2.806229 Invertebrate Feeder
>> Browser
>> com63 Demersal Marine, brackish, freshwater 3.287427 Invertebrate Feeder
>> Browser
>> com64 Demersal Marine, brackish, freshwater 3.292238 Invertebrate Feeder
>> Browser
>> com65 Demersal Marine, brackish 3.265497 Invertebrate Feeder
>> Browser
>> com66 Demersal Marine, brackish, freshwater 3.317879 Invertebrate Feeder
>> Browser
>> com67 Demersal Marine, brackish 3.258586 Invertebrate Feeder
>> Browser
>> com68 Demersal Marine, brackish, freshwater 3.203772 Invertebrate Feeder
>> Browser
>> com69 Demersal Marine, brackish, freshwater 3.289830 Invertebrate Feeder
>> Browser
>> com70 Demersal Marine, brackish 3.326195 Invertebrate Feeder
>> Browser
>> com71 Benthic Marine, brackish, freshwater 3.325590 Invertebrate Feeder
>> Browser
>> com72 Benthic Marine, brackish, freshwater 3.297994 Invertebrate Feeder
>> Browser
>> com73 Demersal Marine, brackish, freshwater 3.331968 Invertebrate Feeder
>> Browser
>> com74 Demersal Marine, brackish, freshwater 3.395514 Invertebrate Feeder
>> Browser
>> com75 Demersal Marine, brackish, freshwater 3.323936 Invertebrate Feeder
>> Browser
>> com76 Demersal Marine, brackish, freshwater 3.201015 Invertebrate Feeder
>> Browser
>> com77 Demersal Marine, brackish, freshwater 3.280311 Invertebrate Feeder
>> Browser
>> com78 Demersal Marine, brackish, freshwater 3.318771 Invertebrate Feeder
>> Browser
>> com79 Demersal Marine, brackish, freshwater 3.318253 Invertebrate Feeder
>> Browser
>> com80 Demersal Marine, brackish, freshwater 3.374939 Invertebrate Feeder
>> Browser
>> com81 Demersal Marine, brackish, freshwater 3.440927 Invertebrate Feeder
>> Browser
>> com82 Demersal Marine, brackish, freshwater 3.381153 Invertebrate Feeder
>> Browser
>> trait6
>> com1 0.5 - 1.0
>> com2 1.0 - 2.0
>> com3 1.0 - 2.0
>> com4 1.0 - 2.0
>> com5 1.0 - 2.0
>> com6 1.0 - 2.0
>> com7 1.0 - 2.0
>> com8 1.0 - 2.0
>> com9 0.5 - 1.0
>> com10 1.0 - 2.0
>> com11 1.0 - 2.0
>> com12 1.0 - 2.0
>> com13 0.5 - 1.0
>> com14 0.5 - 1.0
>> com15 0.5 - 1.0
>> com16 0.5 - 1.0
>> com17 1.0 - 2.0
>> com18 0.5 - 1.0
>> com19 0.5 - 1.0
>> com20 0.5 - 1.0
>> com21 0.5 - 1.0
>> com22 0.5 - 1.0
>> com23 1.0 - 2.0
>> com24 1.0 - 2.0
>> com25 1.0 - 2.0
>> com26 1.0 - 2.0
>> com27 1.0 - 2.0
>> com28 0.5 - 1.0
>> com29 0.5 - 1.0
>> com30 0.5 - 1.0
>> com31 0.5 - 1.0
>> com32 0.5 - 1.0
>> com33 0.5 - 1.0
>> com34 1.0 - 2.0
>> com35 0.5 - 1.0
>> com36 0.5 - 1.0
>> com37 1.0 - 2.0
>> com38 0.5 - 1.0
>> com39 0.5 - 1.0
>> com40 0.5 - 1.0
>> com41 0.5 - 1.0
>> com42 1.0 - 2.0
>> com43 1.0 - 2.0
>> com44 1.0 - 2.0
>> com45 < 0.5
>> com46 < 0.5
>> com47 < 0.5
>> com48 < 0.5
>> com49 < 0.5
>> com50 < 0.5
>> com51 < 0.5
>> com52 0.5 - 1.0
>> com53 0.5 - 1.0
>> com54 < 0.5
>> com55 < 0.5
>> com56 < 0.5
>> com57 < 0.5
>> com58 < 0.5
>> com59 0.5 - 1.0
>> com60 0.5 - 1.0
>> com61 1.0 - 2.0
>> com62 1.0 - 2.0
>> com63 0.5 - 1.0
>> com64 0.5 - 1.0
>> com65 0.5 - 1.0
>> com66 0.5 - 1.0
>> com67 0.5 - 1.0
>> com68 0.5 - 1.0
>> com69 0.5 - 1.0
>> com70 0.5 - 1.0
>> com71 < 0.5
>> com72 < 0.5
>> com73 < 0.5
>> com74 1.0 - 2.0
>> com75 0.5 - 1.0
>> com76 0.5 - 1.0
>> com77 1.0 - 2.0
>> com78 0.5 - 1.0
>> com79 0.5 - 1.0
>> com80 1.0 - 2.0
>> com81 1.0 - 2.0
>> com82 1.0 - 2.0
>>
>> 2016-02-22 13:58 GMT+00:00 stephen sefick <ssefick at gmail.com>:
>>
>>> If memory serves me, dbFD returns a lot of output. What do you want to
>>> plot? Also, please provide reproducible examples, so that we can help you
>>> solve your R related queries.
>>> kindest regards,
>>>
>>> Stephen
>>>
>>> On Mon, Feb 22, 2016 at 7:00 AM, Fabio Monteiro <
>>> fabio.monteiro1992 at gmail.com> wrote:
>>>
>>>> Hi
>>>>
>>>> thank you for your quick answer
>>>>
>>>> I finally managed to insert everything correctly and dbFD is caltulated.
>>>>
>>>> I'm now trying to plot the results.
>>>>
>>>> My objects are matrices.
>>>>
>>>> x is a functional trait and species matrice. a is the species and
>>>> samples
>>>>
>>>> Thank you
>>>>
>>>> 2016-02-22 12:19 GMT+00:00 PIKAL Petr <petr.pikal at precheza.cz>:
>>>>
>>>> > Hi
>>>> >
>>>> > comments inline
>>>> >
>>>> > > -----Original Message-----
>>>> > > From: R-help [mailto:r-help-bounces at r-project.org] On Behalf Of
>>>> Fabio
>>>> > > Monteiro
>>>> > > Sent: Monday, February 22, 2016 11:51 AM
>>>> > > To: r-help at r-project.org
>>>> > > Subject: [R] FD package
>>>> > >
>>>> > > Hi.
>>>> > >
>>>> > > First i would like to say that i'm really new in R. I recently
>>>> started
>>>> > > working with R and i'm using the FD package.
>>>> > >
>>>> > > I'm having some errors that doesn't make any sense.
>>>> > >
>>>> > > I have 2 matrix, one is the species with functional traits and the
>>>> > > second one is the species and abundances.
>>>> >
>>>> > Your objects are matrices or data frames? From docs dbFD expects
>>>> various
>>>> > inputs byt they have to be properly formatted.
>>>> >
>>>> > >
>>>> > > When I try to run the dbFD to calculate the functional diversity,
>>>> the
>>>> > > error is the number of species is different in x and a.
>>>> > >
>>>> > > I checked a lot of times and the number of species is the same and
>>>> > > there are no mistakes in their names like spaces or caps.
>>>> >
>>>> > How did you checked?
>>>> >
>>>> > dim(trait) and dim(abund)
>>>> >
>>>> > shall give you the same number of rows in traits as columns in abund.
>>>> >
>>>> > If trait is vector, you need to use length instead of dim.
>>>> >
>>>> > >
>>>> > > Can you help me?
>>>> >
>>>> > Without better description of your objects and code you used you
>>>> hardly
>>>> > get any answer. You can start by using examples from help page, which
>>>> shall
>>>> > work and see how your data differ from those examples.
>>>> >
>>>> > Cheers
>>>> > Petr
>>>> >
>>>> >
>>>> > >
>>>> > > Fábio Monteiro
>>>> > >
>>>> > > [[alternative HTML version deleted]]
>>>> > >
>>>> > > ______________________________________________
>>>> > > R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see
>>>> > > https://stat.ethz.ch/mailman/listinfo/r-help
>>>> > > PLEASE do read the posting guide http://www.R-project.org/posting-
>>>> > > guide.html
>>>> > > and provide commented, minimal, self-contained, reproducible code.
>>>> >
>>>> > ________________________________
>>>> > Tento e-mail a jakékoliv k němu připojené dokumenty jsou důvěrné a
>>>> jsou
>>>> > určeny pouze jeho adresátům.
>>>> > Jestliže jste obdržel(a) tento e-mail omylem, informujte laskavě
>>>> > neprodleně jeho odesílatele. Obsah tohoto emailu i s přílohami a jeho
>>>> kopie
>>>> > vymažte ze svého systému.
>>>> > Nejste-li zamýšleným adresátem tohoto emailu, nejste oprávněni tento
>>>> email
>>>> > jakkoliv užívat, rozšiřovat, kopírovat či zveřejňovat.
>>>> > Odesílatel e-mailu neodpovídá za eventuální škodu způsobenou
>>>> modifikacemi
>>>> > či zpožděním přenosu e-mailu.
>>>> >
>>>> > V případě, že je tento e-mail součástí obchodního jednání:
>>>> > - vyhrazuje si odesílatel právo ukončit kdykoliv jednání o uzavření
>>>> > smlouvy, a to z jakéhokoliv důvodu i bez uvedení důvodu.
>>>> > - a obsahuje-li nabídku, je adresát oprávněn nabídku bezodkladně
>>>> přijmout;
>>>> > Odesílatel tohoto e-mailu (nabídky) vylučuje přijetí nabídky ze strany
>>>> > příjemce s dodatkem či odchylkou.
>>>> > - trvá odesílatel na tom, že příslušná smlouva je uzavřena teprve
>>>> > výslovným dosažením shody na všech jejích náležitostech.
>>>> > - odesílatel tohoto emailu informuje, že není oprávněn uzavírat za
>>>> > společnost žádné smlouvy s výjimkou případů, kdy k tomu byl písemně
>>>> zmocněn
>>>> > nebo písemně pověřen a takové pověření nebo plná moc byly adresátovi
>>>> tohoto
>>>> > emailu případně osobě, kterou adresát zastupuje, předloženy nebo
>>>> jejich
>>>> > existence je adresátovi či osobě jím zastoupené známá.
>>>> >
>>>> > This e-mail and any documents attached to it may be confidential and
>>>> are
>>>> > intended only for its intended recipients.
>>>> > If you received this e-mail by mistake, please immediately inform its
>>>> > sender. Delete the contents of this e-mail with all attachments and
>>>> its
>>>> > copies from your system.
>>>> > If you are not the intended recipient of this e-mail, you are not
>>>> > authorized to use, disseminate, copy or disclose this e-mail in any
>>>> manner.
>>>> > The sender of this e-mail shall not be liable for any possible damage
>>>> > caused by modifications of the e-mail or by delay with transfer of the
>>>> > email.
>>>> >
>>>> > In case that this e-mail forms part of business dealings:
>>>> > - the sender reserves the right to end negotiations about entering
>>>> into a
>>>> > contract in any time, for any reason, and without stating any
>>>> reasoning.
>>>> > - if the e-mail contains an offer, the recipient is entitled to
>>>> > immediately accept such offer; The sender of this e-mail (offer)
>>>> excludes
>>>> > any acceptance of the offer on the part of the recipient containing
>>>> any
>>>> > amendment or variation.
>>>> > - the sender insists on that the respective contract is concluded only
>>>> > upon an express mutual agreement on all its aspects.
>>>> > - the sender of this e-mail informs that he/she is not authorized to
>>>> enter
>>>> > into any contracts on behalf of the company except for cases in which
>>>> > he/she is expressly authorized to do so in writing, and such
>>>> authorization
>>>> > or power of attorney is submitted to the recipient or the person
>>>> > represented by the recipient, or the existence of such authorization
>>>> is
>>>> > known to the recipient of the person represented by the recipient.
>>>> >
>>>>
>>>> [[alternative HTML version deleted]]
>>>>
>>>> ______________________________________________
>>>> R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see
>>>> https://stat.ethz.ch/mailman/listinfo/r-help
>>>> PLEASE do read the posting guide
>>>> http://www.R-project.org/posting-guide.html
>>>> and provide commented, minimal, self-contained, reproducible code.
>>>
>>>
>>>
>>>
>>> --
>>> Stephen Sefick
>>> **************************************************
>>> Auburn University
>>> Biological Sciences
>>> 331 Funchess Hall
>>> Auburn, Alabama
>>> 36849
>>> **************************************************
>>> sas0025 at auburn.edu
>>> http://www.auburn.edu/~sas0025
>>> **************************************************
>>>
>>> Let's not spend our time and resources thinking about things that are so
>>> little or so large that all they really do for us is puff us up and make us
>>> feel like gods. We are mammals, and have not exhausted the annoying little
>>> problems of being mammals.
>>>
>>> -K. Mullis
>>>
>>> "A big computer, a complex algorithm and a long time does not equal
>>> science."
>>>
>>> -Robert Gentleman
>>>
>>>
>>
>
>
> --
> Stephen Sefick
> **************************************************
> Auburn University
> Biological Sciences
> 331 Funchess Hall
> Auburn, Alabama
> 36849
> **************************************************
> sas0025 at auburn.edu
> http://www.auburn.edu/~sas0025
> **************************************************
>
> Let's not spend our time and resources thinking about things that are so
> little or so large that all they really do for us is puff us up and make us
> feel like gods. We are mammals, and have not exhausted the annoying little
> problems of being mammals.
>
> -K. Mullis
>
> "A big computer, a complex algorithm and a long time does not equal
> science."
>
> -Robert Gentleman
>
>
[[alternative HTML version deleted]]
More information about the R-help
mailing list