[R] Unable to run RcmdrPlugin.survival using 3.2.2 with Windows 10

[Joyaa Antares]

Dear John,

Very many thanks.  Your hypothesis was completely correct - I did save the 
workspace, and this is what created the problem.   As a newbie, being part 
way through an "exercise", saving my workspace intuitively seemed the right 
thing to do.   Clearly not!    So now, before I closed R and Rcmdr, I copied 
and pasted from Rcmdr's script file into a MS Word document, added a few 
comments (with preceding #), and then closed without otherwise saving R's 
script, output, workspace or markdown.  I hope this is reasonable practice. 
If not, I would be grateful for guidance on this.

Once again, very many thanks.  Joyaa

-----Original Message----- 
From: Fox, John
Sent: Friday, September 4, 2015 1:24 PM
To: Joyaa Antares
Cc: r-help at r-project.org
Subject: RE: [R] Unable to run RcmdrPlugin.survival using 3.2.2 with Windows 
10

Dear Joyaa,

> -----Original Message-----
> From: Joyaa Antares [mailto:joyaa at goldcoastosteopathy.com.au]
> Sent: September 3, 2015 9:37 PM
> To: Fox, John <jfox at mcmaster.ca>
> Cc: r-help at r-project.org
> Subject: Re: [R] Unable to run RcmdrPlugin.survival using 3.2.2 with 
> Windows 10
>
> Dear John, Dear List,
>
> Thank you for responding.  Like you, I have tried uninstalling R and 
> reinstalling
> again.  Question 1: having uninstalled R, how do you delete the package 
> library?

You say below that you installed R packages when R was run as administrator 
and that you took all defaults. In that case,  the installed packages will 
be in C:\Program Files\R\R-3.2.2\library . Just delete the library 
directory, which will still be there after R 3.2.2 is uninstalled. I do 
recommend, by the way, that, for using the Rcmdr, you install R with the SDI 
rather than the default MDI, but that doesn't explain your difficulties.

>
> I have used defaults throughout the process, except for running the whole 
> things
> as Administrator rather than a User.  For the mirror, my first two install 
> attempts
> were via a mirror in Germany.  My 3rd and 4th attempts via Cambridge, UK.
>
> Perhaps importantly: the first time I ran the RcmdrPlugin.survival plug-in 
> it
> worked fine.

If you said that before, I missed it.

> I got half way through the exercise I was attempting, then closed
> the programs for the night.  The next day, when I tried to reload the 
> plugin from
> R Commander, the plugin asked me to restart R Commander, but on opting for
> "Yes", this is when R Commander does not open properly.

Here's my hypothesis: When you "closed" R, you saved the R workspace. My 
guess is that this is the source of your problem. If so, the saved workspace 
is in the file .RData in your home directory; delete it and try again.

If this works, in future, exit from the Rcmdr and R via the Rcmdr menus (or 
if closing R directly, don't save the workspace).

I hope this helps,
John

-----------------------------
John Fox, Professor
McMaster University
Hamilton, Ontario
Canada L8S 4M4
Web: socserv.mcmaster.ca/jfox


>
> My thanks to you and the list for your time.  Joyaa (Gold Coast, 
> Queensland,
> Australia)
>
> -----Original Message-----
> From: Fox, John
> Sent: Friday, September 4, 2015 1:29 AM
> To: Joyaa Antares
> Cc: r-help at r-project.org
> Subject: RE: [R] Unable to run RcmdrPlugin.survival using 3.2.2 with 
> Windows
> 10
>
> Dear Joyaa,
>
> I too run R 3.2.2 on a Windows 10 system. I uninstalled R, deleted my 
> package
> library, and then reinstalled R and the Rcmdr and RcmdrPlugin.survival 
> packages.
> I took all defaults, except that I selected the SDI rather than the 
> default MDI for
> Rgui, but I seriously doubt that this is the source of your problem. I 
> used the 0-
> Cloud mirror, both for R
> 3.2.2 and for packages.
>
> I'm afraid that I can't duplicate your problem -- everything works 
> perfectly fine
> for me.
>
> You provided a reasonable amount of detail, but is there anything else you 
> can
> add?
>
> Best,
> John
>
> -----------------------------
> John Fox, Professor
> McMaster University
> Hamilton, Ontario
> Canada L8S 4M4
> web: socserv.mcmaster.ca/jfox
>
>
> ________________________________________
> From: R-help [r-help-bounces at r-project.org] on behalf of Joyaa Antares
> [joyaa at goldcoastosteopathy.com.au]
> Sent: September 3, 2015 8:31 AM
> To: r-help at r-project.org
> Subject: [R] Unable to run RcmdrPlugin.survival using 3.2.2 with Windows 
> 10
>
> Hello r-help,
>
> I am quite new to R.  I downloaded R 3.2.2 for Windows to use with Windows
> 10.
>
> On attempting to load the RcmdrPlugin.survival plug-in I got this error
> message:
>
> Error in structure(.External(.C_dotTclObjv, objv), class = "tclObj") :
>   [tcl] invalid command name "configure".
>
> The lead-up to this was:
>
> * I uninstalled R 3.2.2 and deleted all R files I could find.
> * Downloaded R 3.2.2 to do a fresh install
> * Opened the .exe file as Administrator
> * Ran 64-bit R as Administrator
> * Updated all packages
> * Installed Rcmdr and RcmdrPlugin.survival
> * Ran Rcmdr using library(Rcmdr) from the console
> * This required an install of a host of packages, which I installed
> * Loaded RcmdrPlugin.survival from the Tools menu
> * I was asked to restart R commander, and when I tried it didn't open 
> properly
> (showing only File/Edit/Data in the menu bar), and this wouldn't close 
> properly
> either.  The error message as above showed in the console.
>
> I haven't posted to the list before and would be very grateful for help.
> Thank you.   Joyaa
>         [[alternative HTML version deleted]]
>
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