[R] WGCNA cluster

Peter Langfelder peter.langfelder at gmail.com
Wed Nov 18 19:05:50 CET 2015

Hi Giovanni,

please follow Tutorial I, section 3 (particularly 3d, "Summary output
of network analysis results") at
. This will show you how to output module membership of each CpG into
a file. If you want to assign different colors, you will have to do it
yourself - first choose a set of colors (you will need at least 26),
then you will need to write a simple R code to change the colors.



On Wed, Nov 18, 2015 at 3:31 AM, Calice Giovanni
<giovanni.calice at crob.it> wrote:
> Hi all,
> I am using WGCNA for methylation level network construction e modules detection.
> In my network there are 26 modules with assigned colors and numeric labels, id.
> Which Is the best way to reassign different color to each module?
> How to know the elements associated to each colored module in the cluster?
> Thanks in advance, Regards
> Giovanni
> Laboratory of Preclinical and Translational Research
> IRCCS - CROB Oncology Referral Center of Basilicata - Italy
> Servizio di posta elettronica della Regione Basilicata "Powered By Microsoft Exchange 2007"
> Sito web istituzionale www.regione.basilicata.it

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