[R] Unsupported Fortran 90 compiler or Fortran 90

[Srikanth Gumma]

Thank you Prof. Brian Ripley. I'm writing a mail to glasso maintainer. Let
me see if I could get some help from them.

Regards
Srikanth.

On Mon, 16 Mar 2015 at 19:21 Prof Brian Ripley <ripley at stats.ox.ac.uk>
wrote:

> On 16/03/2015 10:38, Srikanth Gumma wrote:
> > Hi,
> >
> > I'm trying to install diveRsity package in our R installation. however it
> > always fails with the error message "Unsupported Fortran 90 compiler or
> > Fortran 90". Below is the full output. Appreciate any help.
>
> Ask the maintainer of the package concerned (glasso).  Its way of
> detecting the complier is flaky (and does not meet current CRAN
> requirements on cross-platform portability).
>
> >
> > R
> >
> > R version 3.1.2 (2014-10-31) -- "Pumpkin Helmet"
> > Copyright (C) 2014 The R Foundation for Statistical Computing
> > Platform: x86_64-unknown-linux-gnu (64-bit)
> >
> > R is free software and comes with ABSOLUTELY NO WARRANTY.
> > You are welcome to redistribute it under certain conditions.
> > Type 'license()' or 'licence()' for distribution details.
> >
> >    Natural language support but running in an English locale
> >
> > R is a collaborative project with many contributors.
> > Type 'contributors()' for more information and
> > 'citation()' on how to cite R or R packages in publications.
> >
> > Type 'demo()' for some demos, 'help()' for on-line help, or
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> > Type 'q()' to quit R.
> >
> >> install.packages("diversity")
> > --- Please select a CRAN mirror for use in this session ---
> > Warning messages:
> > 1: package ‘diversity’ is not available (for R version 3.1.2)
> > 2: Perhaps you meant ‘diveRsity’ ?
> >> install.packages("diveRsity")
> > also installing the dependencies ‘glasso’, ‘qgraph’
> >
> > trying URL 'http://cran.rstudio.com/src/contrib/glasso_1.8.tar.gz'
> > Content type 'application/x-gzip' length 41768 bytes (40 Kb)
> > opened URL
> > ==================================================
> > downloaded 40 Kb
> >
> > trying URL 'http://cran.rstudio.com/src/contrib/qgraph_1.3.1.tar.gz'
> > Content type 'application/x-gzip' length 211062 bytes (206 Kb)
> > opened URL
> > ==================================================
> > downloaded 206 Kb
> >
> > trying URL 'http://cran.rstudio.com/src/contrib/diveRsity_1.9.73.tar.gz'
> > Content type 'application/x-gzip' length 1330144 bytes (1.3 Mb)
> > opened URL
> > ==================================================
> > downloaded 1.3 Mb
> >
> > * installing *source* package ‘glasso’ ...
> > ** package ‘glasso’ successfully unpacked and MD5 sums checked
> >   This package requires a fortran 90 compiler. We assume
> >   that your fortran 90 environment is set up appropriately.
> >   Reference: Section on 'Using F95 code' in R-exts manual.
> >   R_HOME is /app1/centos6.3/gnu/apps/R-3.1.2/lib64/R
> >      Unsupported Fortran 90 compiler or Fortran 90
> >      compilers unavailable! Stop!
> > ERROR: configuration failed for package ‘glasso’
> > * removing ‘/nfs/app1/centos6.3/gnu/apps/R-3.1.2/lib64/R/library/glasso’
> > ERROR: dependency ‘glasso’ is not available for package ‘qgraph’
> > * removing ‘/nfs/app1/centos6.3/gnu/apps/R-3.1.2/lib64/R/library/qgraph’
> > ERROR: dependency ‘qgraph’ is not available for package ‘diveRsity’
> > * removing ‘/nfs/app1/centos6.3/gnu/apps/R-3.1.2/lib64/R/library/
> diveRsity’
> >
> > The downloaded source packages are in
> >          ‘/tmp/Rtmp2IAilr/downloaded_packages’
> > Warning messages:
> > 1: In install.packages("diveRsity") :
> >    installation of package ‘glasso’ had non-zero exit status
> > 2: In install.packages("diveRsity") :
> >    installation of package ‘qgraph’ had non-zero exit status
> > 3: In install.packages("diveRsity") :
> >    installation of package ‘diveRsity’ had non-zero exit status
> >
> > Regards
> > Srikanth.
> >
> >       [[alternative HTML version deleted]]
> >
> > ______________________________________________
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> >
>
>
> --
> Brian D. Ripley,                  ripley at stats.ox.ac.uk
> Emeritus Professor of Applied Statistics, University of Oxford
> 1 South Parks Road, Oxford OX1 3TG, UK
>

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