[R] Unsupported Fortran 90 compiler or Fortran 90

Srikanth Gumma sri4mailing at gmail.com
Mon Mar 16 11:38:47 CET 2015


Hi,

I'm trying to install diveRsity package in our R installation. however it
always fails with the error message "Unsupported Fortran 90 compiler or
Fortran 90". Below is the full output. Appreciate any help.

R

R version 3.1.2 (2014-10-31) -- "Pumpkin Helmet"
Copyright (C) 2014 The R Foundation for Statistical Computing
Platform: x86_64-unknown-linux-gnu (64-bit)

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> install.packages("diversity")
--- Please select a CRAN mirror for use in this session ---
Warning messages:
1: package ‘diversity’ is not available (for R version 3.1.2)
2: Perhaps you meant ‘diveRsity’ ?
> install.packages("diveRsity")
also installing the dependencies ‘glasso’, ‘qgraph’

trying URL 'http://cran.rstudio.com/src/contrib/glasso_1.8.tar.gz'
Content type 'application/x-gzip' length 41768 bytes (40 Kb)
opened URL
==================================================
downloaded 40 Kb

trying URL 'http://cran.rstudio.com/src/contrib/qgraph_1.3.1.tar.gz'
Content type 'application/x-gzip' length 211062 bytes (206 Kb)
opened URL
==================================================
downloaded 206 Kb

trying URL 'http://cran.rstudio.com/src/contrib/diveRsity_1.9.73.tar.gz'
Content type 'application/x-gzip' length 1330144 bytes (1.3 Mb)
opened URL
==================================================
downloaded 1.3 Mb

* installing *source* package ‘glasso’ ...
** package ‘glasso’ successfully unpacked and MD5 sums checked
 This package requires a fortran 90 compiler. We assume
 that your fortran 90 environment is set up appropriately.
 Reference: Section on 'Using F95 code' in R-exts manual.
 R_HOME is /app1/centos6.3/gnu/apps/R-3.1.2/lib64/R
    Unsupported Fortran 90 compiler or Fortran 90
    compilers unavailable! Stop!
ERROR: configuration failed for package ‘glasso’
* removing ‘/nfs/app1/centos6.3/gnu/apps/R-3.1.2/lib64/R/library/glasso’
ERROR: dependency ‘glasso’ is not available for package ‘qgraph’
* removing ‘/nfs/app1/centos6.3/gnu/apps/R-3.1.2/lib64/R/library/qgraph’
ERROR: dependency ‘qgraph’ is not available for package ‘diveRsity’
* removing ‘/nfs/app1/centos6.3/gnu/apps/R-3.1.2/lib64/R/library/diveRsity’

The downloaded source packages are in
        ‘/tmp/Rtmp2IAilr/downloaded_packages’
Warning messages:
1: In install.packages("diveRsity") :
  installation of package ‘glasso’ had non-zero exit status
2: In install.packages("diveRsity") :
  installation of package ‘qgraph’ had non-zero exit status
3: In install.packages("diveRsity") :
  installation of package ‘diveRsity’ had non-zero exit status

Regards
Srikanth.

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