[R] [BioC] comparing two tables
tomkina
tsimakova at sequoiag.com
Thu May 30 10:45:36 CEST 2013
Hello,
I have the similar task. I have two tables and I need to get the third
table containing data from both of them with extra column with information
of what data from which table:
table1
chr pos ref alt
chr1 5 A G
chr1 8 T C
chr2 2 C T
table2
chr pos ref alt
chr1 5 A G
chr1 7 T C
chr1 8 T A
resulted table
chr pos ref alt info
chr1 5 A G 1, 4
chr1 7 T C 4
chr1 8 T C 1
chr1 8 T A 4
I need all 4 columns (chr, pos, ref and alt) to be compared. I didn't find
this function in Bioconductor. I am a beginner at R and would appreciate any
help.
Thanks,
Tamara
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