[R] Help with heatmap & hclust

sara sadozai s.sadozai16 at gmail.com
Tue Jul 2 11:19:56 CEST 2013


hello i have a problem since days with the heatmap function and my own
cluster function...

i try to put it like this but it is not working :

heatmap(data, hclustfun=function(x)myclust(x))

where myclust is a simple fonction

myclust= function(data){

#D=dist(data)
hc=hclust(D)

#mclust= as.mclust(hc$merge)
#m=reorder.mclust(data)

mc=hc
mc$order=leaf

return(mc=mc)

}


and it returns Error in heatmap(data, hclustfun = function(x) myclust(x)) :
  column dendrogram ordering gave index of wrong length


Actually it is working with other cluster fonction like diana() or
pam() but not with my own function...

Any help ???



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