[R] read.table()

Tanja Vukov tvukov at gmail.com
Sat Dec 8 20:58:32 CET 2012


Hi!
I think you have problem with "flag_var". I suggest to put just
"flagvar". Do not use "_" in variable names. I would suggest not to
use both "_" or "-" anywhere in data file. I am just a beginner with R
but think that is the problem...
Cheers!
Tanja.

On Sat, Dec 8, 2012 at 8:29 PM, Prof Brian Ripley <ripley at stats.ox.ac.uk> wrote:
> On 08/12/2012 19:10, Muhuri, Pradip (SAMHSA/CBHSQ) wrote:
>>
>>
>> Hi List,
>>
>> I have spent more than 30 minutes, but failed to read in this file using
>> the read.table() function. I could not figure out how to fix the following
>> error.
>
>
> Well, we have a whole manual on this, mentioned on ?read.table (see See
> Also)  Have you read it?  fortunes::fortune(14) applies.
>
> The issue is what the separator is.  You have specified whitespace, and that
> is not correct.  The original might have had tabs (see ?read.delim) but as
> pasted into this email only a human can disentangle this file.
>
>
>> Error in scan(file, what, nmax, sep, dec, quote, skip, nlines, na.strings,
>> :   line 1 did not have 6 elements
>>
>> Any help would be be appreciated.
>>
>> Thanks,
>>
>> Pradip Muhuri
>>
>>
>> ####### below is the  reproducible example
>> xd1 <-  "race    age   percent  sepercent  flag_var
>>           Mexican 12-17  5.7926   0.64195      any
>>      Puerto Rican 12-17  5.1975   0.24929      any
>>             Cuban 12-17  3.7977   1.00487      any
>>      C-S American 12-17  4.3665   0.55329      any
>>         Dominican 12-17  1.8149 0.46677      any
>>   Spanish (Spain) 12-17  6.1971   0.98386      any
>>    Multi Hisp Eth 12-17  6.7006   1.12464      any
>>          NH White 12-17  4.8442   0.08660      any
>>          NH Black 12-17  3.6943   0.16045      any
>>          NH AM-AK 12-17  9.6325   1.06100      any
>>         NH HI-OPI 12-17  3.9189   1.08047      any
>>          NH Asian 12-17  1.9115   0.28432      any
>>    NH Multiracial 12-17  6.4255   0.51434      any
>>            Mexican 18-25  8.9284   0.73022      any
>>       Puerto Rican 18-25  6.1364   0.28394      any
>>              Cuban 18-25  8.6782   1.45543      any
>>       C-S American 18-25  5.9360   0.59899      any
>>          Dominican 18-25  7.7642   1.64553      any
>>    Spanish (Spain) 18-25  9.2632   1.15652      any
>>     Multi Hisp Eth 18-25 11.3566   1.79282      any
>>           NH White 18-25  8.6484   0.11866      any
>>           NH Black 18-25  7.5972   0.24926      any
>>           NH AM-AK 18-25 13.5041   1.57275      any
>>          NH HI-OPI 18-25  8.0227   1.41348      any
>>           NH Asian 18-25  3.2701   0.32414      any
>>     NH Multiracial 18-25 10.6489   0.85105      any
>>            Mexican   26+  3.2110   0.51683      any
>>       Puerto Rican   26+  1.6273   0.15033      any
>>              Cuban   26+  1.4419   0.44118      any
>>       C-S American   26+  1.0187   0.26594      any
>>          Dominican   26+  0.9554   0.50275      any
>>    Spanish (Spain)   26+  2.5976   0.86230      any
>>     Multi Hisp Eth   26+  1.1345   0.66375      any
>>           NH White   26+  1.5510   0.04156      any
>>           NH Black   26+  2.8763   0.15133      any
>>           NH AM-AK   26+  3.9674   0.76611      any
>>          NH HI-OPI   26+  1.2919   0.66205      any
>>           NH Asian   26+  0.7207   0.13870      any
>>     NH Multiracial   26+  3.0668   0.52334      any
>>            Mexican 12-17  4.3152   0.53235      mrj
>>       Puerto Rican 12-17  3.7237   0.20969      mrj
>>              Cuban 12-17  2.0616   0.67248      mrj
>>       C-S American 12-17  3.3282   0.47392      mrj
>>          Dominican 12-17  1.3797   0.40435      mrj
>>    Spanish (Spain) 12-17  5.1810   0.93979      mrj
>>     Multi Hisp Eth 12-17  4.8915   0.94816      mrj
>>           NH White 12-17  3.6190   0.07379      mrj
>>           NH Black 12-17  2.8196   0.14042      mrj
>>           NH AM-AK 12-17  6.5091   0.85124      mrj
>>          NH HI-OPI 12-17  3.6267   1.06724      mrj
>>           NH Asian 12-17  1.3162 0.23575      mrj
>>     NH Multiracial 12-17  5.0657   0.49614      mrj
>>            Mexican 18-25  7.3802   0.67992      mrj
>>       Puerto Rican 18-25  4.3260   0.24191      mrj
>>              Cuban 18-25  6.1433   1.19242      mrj
>>       C-S American 18-25  3.9166   0.51272      mrj
>>          Dominican 18-25  5.8000   1.24097      mrj
>>    Spanish (Spain) 18-25  6.8646   1.01387      mrj
>>     Multi Hisp Eth 18-25 10.1134   1.75013      mrj
>>           NH White 18-25  5.8656   0.10100      mrj
>>           NH Black 18-25  6.6869   0.23643      mrj
>>           NH AM-AK 18-25 11.2989   1.51687      mrj
>>          NH HI-OPI 18-25  5.6302   1.14561      mrj
>>           NH Asian 18-25  2.3418   0.28309      mrj
>>     NH Multiracial 18-25  8.2696   0.77139      mrj
>>            Mexican   26+  1.1658   0.33967      mrj
>>       Puerto Rican   26+  0.6757   0.09329      mrj
>>              Cuban   26+  0.6653   0.31239      mrj
>>       C-S American   26+  0.3177   0.17604      mrj
>>          Dominican   26+  0.5616   0.39780      mrj
>>    Spanish (Spain)   26+ 1.8078 0.82590      mrj
>>     Multi Hisp Eth   26+  0.8468   0.63529      mrj
>>           NH White   26+  0.6915   0.02791      mrj
>>           NH Black   26+ 1.5675 0.12031      mrj
>>           NH AM-AK   26+ 1.7273 0.37673      mrj
>>          NH HI-OPI   26+  0.0356   0.03535      mrj
>>           NH Asian   26+  0.2687   0.07564      mrj
>>     NH Multiracial   26+  1.3419   0.30074      mrj
>>            Mexican 12-17  1.2074 0.36082      anl
>>       Puerto Rican 12-17  1.0772   0.11547      anl
>>              Cuban 12-17  1.2569 0.67109      anl
>>       C-S American 12-17  0.6213   0.22726      anl
>>          Dominican 12-17  0.1412   0.08552      anl
>>    Spanish (Spain) 12-17  0.9625   0.25453      anl
>>     Multi Hisp Eth 12-17  1.2863   0.43909      anl
>>           NH White 12-17  1.1490   0.04289      anl
>>           NH Black 12-17  0.5932   0.06220      anl
>>           NH AM-AK 12-17  1.9117   0.50122      anl
>>          NH HI-OPI 12-17  0.3833   0.20240      anl
>>           NH Asian 12-17  0.4782   0.14706      anl
>>     NH Multiracial 12-17  1.5369   0.25321      anl
>>            Mexican 18-25  1.1836   0.24209      anl
>>       Puerto Rican 18-25  1.0337   0.11015      anl
>>              Cuban 18-25  1.2738   0.45891      anl
>>       C-S American 18-25  0.5598   0.15047      anl
>>          Dominican 18-25  0.4720   0.31559      anl
>>    Spanish (Spain) 18-25  1.7871   0.64048      anl
>>     Multi Hisp Eth 18-25  1.2764 0.48779      anl
>>           NH White 18-25  2.0818   0.05831      anl
>>          NH Black 18-25  0.7851   0.07803      anl
>>          NH AM-AK 18-25  1.8964   0.46240      anl
>>         NH HI-OPI 18-25  1.9397 0.73301      anl
>>          NH Asian 18-25  0.4858   0.13528      anl
>>    NH Multiracial 18-25  1.7864 0.30651      anl
>>           Mexican   26+  0.4014   0.08306      anl
>>      Puerto Rican   26+  0.4536   0.07721      anl
>>             Cuban   26+  0.2164   0.17096      anl
>>      C-S American   26+  0.2233   0.09101      anl
>>         Dominican   26+  0.0000   0.00000      anl
>>   Spanish (Spain)   26+  1.1527   0.74125      anl
>>    Multi Hisp Eth   26+  0.0303   0.03045      anl
>>          NH White   26+  0.4970   0.02275      anl
>>          NH Black   26+  0.3748   0.06124      anl
>>          NH AM-AK   26+ 1.4842 0.52284      anl
>>         NH HI-OPI   26+  0.3898   0.34827      anl
>>          NH Asian   26+  0.2536   0.07643      anl
>>    NH Multiracial   26+  0.5120   0.18326      anl
>>           Mexican 12-17  0.2453   0.15761      coc
>>      Puerto Rican 12-17  0.4351   0.06999      coc
>>             Cuban 12-17  0.2472   0.24698      coc
>>      C-S American 12-17  0.2399   0.15804      coc
>>         Dominican 12-17  0.0000   0.00000      coc
>>   Spanish (Spain) 12-17  0.5315   0.30907      coc
>>    Multi Hisp Eth 12-17  0.9797   0.53981      coc
>>          NH White 12-17  0.3559   0.02305      coc
>>          NH Black 12-17  0.0220   0.01235      coc
>>          NH AM-AK 12-17  0.3588   0.23956      coc
>>         NH HI-OPI 12-17  0.0000   0.00000      coc
>>          NH Asian 12-17  0.1171   0.07887      coc
>>    NH Multiracial 12-17  0.4702   0.14823      coc
>>           Mexican 18-25  1.1540   0.26424      coc
>>      Puerto Rican 18-25  1.3422   0.12707      coc
>>             Cuban 18-25  1.6312 0.69363      coc
>>      C-S American 18-25  0.8669   0.23394      coc
>>         Dominican 18-25  0.6003   0.43959      coc
>>   Spanish (Spain) 18-25  1.9886   0.59004      coc
>>    Multi Hisp Eth 18-25  1.8588 0.86984      coc
>>          NH White 18-25  1.3990   0.04700      coc
>>          NH Black 18-25  0.3640   0.04961      coc
>>          NH AM-AK 18-25  2.2718   0.77117      coc
>>         NH HI-OPI 18-25  0.8386   0.47913      coc
>>          NH Asian 18-25  0.1947   0.05994      coc
>>    NH Multiracial 18-25  1.5209 0.30649      coc
>>           Mexican   26+ 1.4155 0.39542      coc
>>      Puerto Rican   26+  0.5618   0.09323      coc
>>             Cuban   26+  0.7766   0.31905      coc
>>      C-S American   26+  0.3364   0.15414      coc
>>         Dominican   26+  0.2632   0.26477      coc
>>   Spanish (Spain)   26+  0.1596   0.07740      coc
>>    Multi Hisp Eth   26+  0.2521   0.18020      coc
>>          NH White   26+  0.3928   0.02073      coc
>>          NH Black   26+  1.1867   0.09546      coc
>>          NH AM-AK   26+  0.6865   0.24570      coc
>>         NH HI-OPI   26+  0.5155   0.49176      coc
>>          NH Asian   26+  0.0787   0.04558      coc
>>    NH Multiracial   26+  1.1320   0.37928      coc
>>         Mexican 12-17  0.6556   0.23195      inh
>>      Puerto Rican 12-17  0.6060   0.08943      inh
>>             Cuban 12-17  0.4765   0.36661      inh
>>      C-S American 12-17  0.3629   0.12994      inh
>>         Dominican 12-17  0.0300   0.03006      inh
>>   Spanish (Spain) 12-17  0.2020   0.11445      inh
>>    Multi Hisp Eth 12-17  0.7095   0.32063      inh
>>          NH White 12-17  0.4161   0.02587      inh
>>          NH Black 12-17  0.2608   0.04218      inh
>>          NH AM-AK 12-17  1.3372 0.40763      inh
>>         NH HI-OPI 12-17  0.1116   0.06566      inh
>>          NH Asian 12-17  0.1580   0.08034      inh
>>    NH Multiracial 12-17  0.5472   0.13080      inh
>>           Mexican 18-25  0.0160   0.01601      inh
>>      Puerto Rican 18-25  0.2163   0.06270      inh
>>             Cuban 18-25  0.3252   0.32468      inh
>>      C-S American 18-25  0.2238   0.12254      inh
>>         Dominican 18-25  0.9445   0.94734      inh
>>   Spanish (Spain) 18-25  0.0443   0.03141      inh
>>    Multi Hisp Eth 18-25  0.6523   0.57082      inh
>>          NH White 18-25  0.1016   0.01257      inh
>>          NH Black 18-25  0.0617   0.02371      inh
>>          NH AM-AK 18-25  0.2387   0.14246      inh
>>         NH HI-OPI 18-25  0.0000   0.00000      inh
>>          NH Asian 18-25  0.1894   0.06962      inh
>>    NH Multiracial 18-25  0.0562   0.03261      inh
>>           Mexican   26+  0.0160   0.01600      inh
>>      Puerto Rican   26+  0.0185   0.01276      inh
>>             Cuban   26+  0.0000   0.00000      inh
>>      C-S American   26+  0.0696   0.06954      inh
>>         Dominican   26+  0.0000   0.00000      inh
>>   Spanish (Spain)   26+  0.1571   0.11467      inh
>>    Multi Hisp Eth   26+  0.0000   0.00000      inh
>>          NH White   26+  0.0174   0.00456      inh
>>          NH Black   26+  0.0131   0.00757      inh
>>          NH AM-AK   26+  0.2587   0.24381      inh
>>         NH HI-OPI   26+  0.0000   0.00000      inh
>>          NH Asian   26+  0.0607   0.03372      inh
>>    NH Multiracial   26+  0.0433   0.02960      inh"
>>
>> agerace <- read.table(textConnection(xd1), header=TRUE, as.is=TRUE)
>> ______________________________________________
>> R-help at r-project.org mailing list
>> https://stat.ethz.ch/mailman/listinfo/r-help
>> PLEASE do read the posting guide
>> http://www.R-project.org/posting-guide.html
>> and provide commented, minimal, self-contained, reproducible code.
>>
>
>
> --
> Brian D. Ripley,                  ripley at stats.ox.ac.uk
> Professor of Applied Statistics,  http://www.stats.ox.ac.uk/~ripley/
> University of Oxford,             Tel:  +44 1865 272861 (self)
> 1 South Parks Road,                     +44 1865 272866 (PA)
> Oxford OX1 3TG, UK                Fax:  +44 1865 272595
>
>
> ______________________________________________
> R-help at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.




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