[R] extract value from mer object ?
Maas James Dr (MED)
J.Maas at uea.ac.uk
Tue May 17 14:20:16 CEST 2011
What is the easiest way to extract a value from a 'mer' object from glmer? The first I need is the
trtpair Std.Dev. which in this case is 0.17542?
I've managed to get the fixed effects numbers from
summary(fednmaout)@coeffs
but no luck with the Random effects stuff.
TIA
Jim
> fednmaout
Linear mixed model fit by REML
Formula: lor ~ as.factor(t2) + as.factor(t3) + (1 | trtpair)
AIC BIC logLik deviance REMLdev
97.17 107.6 -43.58 83.12 87.17
Random effects:
Groups Name Variance Std.Dev.
trtpair (Intercept) 0.030771 0.17542
Residual 0.230785 0.48040
Number of obs: 60, groups: trtpair, 3
Fixed effects:
Estimate Std. Error t value
(Intercept) 0.3752 0.3563 1.053
as.factor(t2)1 -0.1677 0.2909 -0.576
as.factor(t3)1 0.1796 0.2909 0.617
Correlation of Fixed Effects:
(Intr) a.(2)1
as.fctr(2)1 -0.816
as.fctr(3)1 -0.816 0.500
===============================
Dr. Jim Maas
University of East Anglia
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