[R] to check if a group of values is randomly distributed
Ben Bolker
bbolker at gmail.com
Sat May 14 03:52:59 CEST 2011
elaine kuo <elaine.kuo.tw <at> gmail.com> writes:
>
> Dear list,
>
> I have 603 numbers depicting range sizes of birds in Japan.
> I would like to learn if the 603 range sizes are randomly distributed or
> not, in order to check if they meet mid-domain effects.
>
> Please kindly advise if any R package or function can check the fit.
> Also, any more references are highly appreciated.
> Thank you
>
If you are really interested in mid-domain effects in ecology,
there is a whole literature on the proper way to do randomization
tests -- generally different variants of placing the observed ranges
randomly within a specified domain with the constraint that the
entire range must fall within the domain, then computing something
about the spatial distribution of range densities (i.e. number of
coincident ranges at a particular point, or local diversity).
I wrote stuff like this for a special case (turtle nesting ranges)
a long time ago, but the code is probably several computer systems
ago and unretrievable. You might try a query on the r-sig-ecology
list. For references, just try searching "mid-domain effect"
or "mid-domain hypothesis" -- Colwell and Gotelli have done a lot
in this area.
Not in R, but googling finds this:
<http://viceroy.eeb.uconn.edu/RangeModelPages/MDEReferences.htm>
Other than that, "are the range sizes randomly distributed"
is a fairly poorly posed question -- they fit *some* distribution.
Your question above is different from the typical mid-domain hypothesis
question, which is about the arrangement of ranges rather than
their distribution of sizes.
Ben Bolker
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