[R] Problems installing SJava

[Uwe Ligges]

Are you sure "rJava" is not fine for you?

Uwe Ligges

On 16.08.2011 17:16, Luis Felipe Parra wrote:
> Hello, I am trying to install SJava but I haven't been able to complete it
> successfully. I have tried to install it from bioconductor using the
> followin code and got the following output:
>
>> source("http://www.bioconductor.org/biocLite.R")
> BioC_mirror = http://bioconductor.org
> Change using chooseBioCmirror().
>>      biocLite("SJava")
> Using R version 2.12.2, biocinstall version 2.7.7.
> Installing Bioconductor version 2.7 packages:
> [1] "SJava"
> Please wait...
>
> Installing package(s) into ‘C:\Users\Hp\Documents/R/win-library/2.12’
> (as ‘lib’ is unspecified)
> Mensajes de aviso perdidos
> In getDependencies(pkgs, dependencies, available, lib) :
>    package ‘SJava’ is not available
>
>
> And I have also tried the instructions: found in
> http://www.omegahat.org/RSJava/.
>
> cd *$RHOME*/src/library
>     unzip SJava_0.69-0.zip
>     cd SJava
>     ./configure.win $RHOME
>     cd *$RHOME*/src/gnuwin32
>     make pkg-SJava
>
> But when I tried the line unzip SJava_0.69-0.zip it tells me the command
> cannot be recognized. If I unzip the file manually and then try the
> line ./configure.win
> $RHOME I get "." ccannot be recognized. Does somebody know what might I be
> doing wrong. Or which is an easier way to install this package?
>
> My computer is on Window 7 professional (32 bits)
>
> Thank you
>
> Felipe Parra
>
> 	[[alternative HTML version deleted]]
>
>
>
>
> ______________________________________________
> R-help at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.