[R] glm.fit to use LAPACK instead of LINPACK
Ted
tchiang at sickkids.ca
Tue Oct 20 21:18:16 CEST 2009
Hi,
I understand that the glm.fit calls LINPACK fortran routines instead of
LAPACK because it can handle the 'rank deficiency problem'. If my data
matrix is not rank deficient, would a glm.fit function which runs on
LAPACK be faster? Would this be worthwhile to convert glm.fit to use
LAPACK? Has anyone done this already?? What is the best way to do this?
I'm looking at very large datasets (thousands of glm calls), and would
like to know if it's worth the effort for performance issues.
Thanks,
Ted
-------------------------------------
Ted Chiang
Bioinformatics Analyst
Centre for Computational Biology
Hospital for Sick Children, Toronto
416.813.7028
tchiang at sickkids.ca
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