[R] Using apply to get group means
Alan Cohen
CohenA at smh.toronto.on.ca
Tue Mar 31 18:09:40 CEST 2009
Hi all,
I'm trying to improve my R skills and make my programming more efficient and succinct. I can solve the following question, but wonder if there's a better way to do it:
I'm trying to calculate mean by several variables and then put this back into the original data set as a new variable. For example, if I were measuring weight, I might want to have each individual's weight, and also the group mean by, say, race, sex, and geographic region. The following code works:
> x1<-rep(c("A","B","C"),3)
> x2<-c(rep(1,3),rep(2,3),1,2,1)
> x3<-c(1,2,3,4,5,6,2,6,4)
> x<-as.data.frame(cbind(x1,x2,x3))
> x3.mean<-rep(0,nrow(x))
> for (i in 1:nrow(x)){
+ x3.mean[i]<-mean(as.numeric(x[,3][x[,1]==x[,1][i]&x[,2]==x[,2][i]]))
+ }
> cbind(x,x3.mean)
x1 x2 x3 x3.mean
1 A 1 1 1.5
2 B 1 2 2.0
3 C 1 3 3.5
4 A 2 4 4.0
5 B 2 5 5.5
6 C 2 6 6.0
7 A 1 2 1.5
8 B 2 6 5.5
9 C 1 4 3.5
However, I'd love to be able to do this with "apply" rather than a for-loop. Or is there a built-in function? Any suggestions?
Also, any way to avoid the hassles with having to convert to a data frame and then again to numeric when one variable is character?
Cheers,
Alan Cohen
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