[R] [R-pkgs] package installation fails (RandomFields)
William Dunlap
wdunlap at tibco.com
Thu Jun 11 16:51:23 CEST 2009
The offending lines don't look right to me:
38 typedef struct key_type;
261 typedef struct mpp_storage;
309 typedef struct cov_fct;
Shouldn't they be 'typedef struct struct_name typedefed_name'?
Later in the file there are proper typedef's for these things.
Bill Dunlap
TIBCO Software Inc - Spotfire Division
wdunlap tibco.com
> -----Original Message-----
> From: r-help-bounces at r-project.org
> [mailto:r-help-bounces at r-project.org] On Behalf Of Martin Maechler
> Sent: Thursday, June 11, 2009 12:42 AM
> To: Drew Hoysak
> Cc: r-help at r-project.org
> Subject: Re: [R] [R-pkgs] package installation fails (RandomFields)
>
> [[ NOTE: This accidentally was approved to go to R-packages,
> it should never have gone there, and I have deleted it
> from the archives.
> Please *only* reply to R-help (and the OP)!
> ]]
>
> >>>>> "DH" == Drew Hoysak <hoysak at wcgwave.ca>
> >>>>> on Wed, 10 Jun 2009 14:40:32 -0500 writes:
>
> DH> I have been unable to install the package
> RandomFields. I am using R
> DH> 2.9.0-4 on Ubuntu 9.04.
>
> How exactly did you install R? Just as ubuntu package?
> {probably, given the somewhat particular version number}
>
> DH> To install, I use the command:
>
> DH> sudo R CMD INSTALL RandomFields_1.3.37.tar.gz
>
>
> DH> The output follows below. Any help Would be appreciated.
>
> DH> D. Hoysak
> DH> Brandon University
>
>
> DH> * Installing to library '/usr/local/lib/R/site-library'
> DH> * Installing *source* package 'RandomFields' ...
> DH> ** libs
> DH> g++ -I/usr/share/R/include -g -fpic -g -O2 -c D.H.cc -o D.H.o
> DH> In file included from D.H.cc:27:
> DH> RFsimu.h:38: warning: 'typedef' was ignored in this
> declaration
> DH> RFsimu.h:261: warning: 'typedef' was ignored in this
> declaration
> DH> RFsimu.h:309: warning: 'typedef' was ignored in this
> declaration
>
> [..........................]
> [..........................]
>
> DH> RFsimu.h:309: warning: 'typedef' was ignored in this
> declaration
> DH> g++ -I/usr/share/R/include -g -fpic -g -O2 -c
> win_linux_aux.cc -o
> DH> win_linux_aux.o
> DH> g++ -shared -o RandomFields.so D.H.o Hyperfcts.o
> MPP.o MPPFcts.o
> DH> RFCovFcts.o RFcircembed.o RFdirect.o RFempvario.o RFgetNset.o
> DH> RFhyperplan.o RFinitNerror.o RFnugget.o RFother.o
> RFsimu.o RFspectral.o
> DH> RFtbm.o Xempvario.o addownfctns.o auxiliary.o avltr.o
> extremes.o
> DH> modelling.o win_linux_aux.o -llapack -L/usr/lib/R/lib -lR
> DH> /usr/bin/ld: cannot find -llapack
> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
>
> This looks like a setup problem of the R installation you have;
> I'd guess that you would also see problems installing other R
> packages that rely on LAPACK.
>
>
>
> DH> collect2: ld returned 1 exit status
> DH> make: *** [RandomFields.so] Error 1
> DH> ERROR: compilation failed for package 'RandomFields'
> DH> * Removing '/usr/local/lib/R/site-library/RandomFields'
>
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