[R] problem with bulk insert into a *.csv file
venkata kirankumar
kiran4u2all at gmail.com
Tue Jun 9 06:36:49 CEST 2009
Hi jim,
I am caliculating these caliculation on quaring on 4 tables and preparing
subsets of those and from there I am getting the final results
that is
"034P91"|"d947468f-95ff-4844-8d04-36619ed2cced"|1|"Control"|9686|"brain"|9301|7912|10746|10742|9710|12591|7933|12612|"Gram"|2.014|1.721|1.8902|0.0772662927802285|0|1
this contains study "*Identyfier " *which contains *4 trialgroups and each
group contains 2genders and each gender contains nearly 50 speciman types
for eachspeciman type I have to caliculate mean,max,min,standered
deviation,difference between treatmentgroup mean to controlgroup mean,and
ratio between treatmentgroup mean to controlgroup mean*
*this will repeate for 10,000 studies*
*right now I am appending these values to the file row wise with making it
data.frame andding to the index.csv*
**
if any thing like keeping these rows in memory and inserting into *index.csv
*file at once means it will reduce time taken for creating the file
is there any thing to do such type of bulk insert in R-project means saves
lots of time and improves performance to my project
can you please suggest me if any thing is there like that and I am sending
my script file to you for the referance
thanks in advance
kiran
On Mon, Jun 8, 2009 at 9:43 PM, jim holtman <jholtman at gmail.com> wrote:
> You can always open a connection and write the rows out as you have
> calculated them. It would be nice if you had included at least a subset of
> the calculations that you are doing so that we can understand the problem
> you are trying to solve.
>
> On Mon, Jun 8, 2009 at 11:43 AM, venkata kirankumar <
> kiran4u2all at gmail.com> wrote:
>
>> Hi all,
>>
>> I am trying to create a "index.csv" with caliculating different
>> types of caliculations .
>> In that i have to caliculate on 10,000 studies and have to insert many no
>> of
>> rows more than 500,000
>> for that right now I am inserting every row after caliculating and doing
>> data.frame
>> but its taking much time to create that index.csv
>>
>> is there any thing like bulk insert in to file with keeping those rows in
>> memory and inserting into table
>> if any thing is there means please give me some idea to do bulk insert
>> then I can save time to create index.csv file
>>
>> thanks in advance
>>
>>
>> kiran
>>
>> [[alternative HTML version deleted]]
>>
>> ______________________________________________
>> R-help at r-project.org mailing list
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>> PLEASE do read the posting guide
>> http://www.R-project.org/posting-guide.html<http://www.r-project.org/posting-guide.html>
>> and provide commented, minimal, self-contained, reproducible code.
>>
>
>
>
> --
> Jim Holtman
> Cincinnati, OH
> +1 513 646 9390
>
> What is the problem that you are trying to solve?
>
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