[R] shared axes in multipanel plot
Gabor Grothendieck
ggrothendieck at gmail.com
Mon Dec 14 22:04:39 CET 2009
One resolution of the need to go outside of pnl would be to use this line:
tt <- unique(x)
in place of tt <- time(z). That would overcome the objection that the
pnl function is not self contained.
On Mon, Dec 14, 2009 at 3:44 PM, Gabor Grothendieck
<ggrothendieck at gmail.com> wrote:
> Try this:
> You seem to have found a problem. At any rate try this instead:
>
> pnl <- function(x, y, ...) {
> tt <- time(z)
> y <- matrix(y, length(tt))
> for(j in 1:ncol(y)) panel.plot.default(tt, y[,j], ...)
> panel.lines(tt, baseline, lwd = 2, col = grey(0.5))
> panel.lines(tt, b2)
> }
>
> On Mon, Dec 14, 2009 at 3:19 PM, Jennifer Young
> <Jennifer.Young at math.mcmaster.ca> wrote:
>>> On Mon, Dec 14, 2009 at 11:30 AM, Jennifer Young
>>> <Jennifer.Young at math.mcmaster.ca> wrote:
>>>> splendid!
>>>>
>>>> This worked well, but there are two oddities that I can't resolve.
>>>>
>>>> 1. In the real data, the "baseline" is a cumulative probability plot
>>>> (from
>>>> simulations) rather than the straight line. The panel.lines plots this
>>>> curve, but seems to join the first and last points together.
>>>> panel.points(x, baseline, type="l") did the same.
>>>> I checked that the vector is indeed sorted properly, so I'm not sure why
>>>> it should connect the first point to the last.
>>>
>>> I can't reproduce the problem based on this description.
>>
>> sorry that was lazy of me. If you modify the code you gave me as follows
>> (with an extra line of the sqare root of "baseline", as an example) the
>> first and last points are joined. I didn't notice this before when
>> "baseline" was just a line.
>>
>> baseline <- (1:20)/20
>> dat1 <- matrix(baseline,20,8)
>> dat <- dat1+matrix(rnorm(20*8)/30, 20,8)
>> b2<-sqrt(baseline)
>> pnl <- function(x, ...) {
>> panel.plot.default(x, ...)
>> panel.lines(x, baseline, lwd = 2, col = grey(0.5))
>> panel.lines(x, b2)
>> }
>> nc <- ncol(dat)
>> screens <- rep(1:(nc/2), each = 2)
>> z <- zoo(dat)
>> colnames(z) <- paste("Group", screens)
>> xyplot(z, screens = screens , layout = c(2, 2), col = "black", lty =
>> 2, scales = list(y = list(relation = "same")), panel = pnl)
>>
>>
>>>
>>>>
>>>> 2. The screens are correctly labeled, but in the wrong order (left to
>>>> right, top to bottom: 3,4,1,2). Is this easily corrected?
>>>
>>> xyplot(..., as.table = TRUE) will give one reordering.
>>>
>>> Another possibility is:
>>> plt <- xplot(...)
>>> plt[ix]
>>> where ix is a permutation of 1:4
>>>
>>>>
>>
>> as.table=TRUE did the trick thanks.
>>
>
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