[R] Sweave, and long lasting scripts

[Thibaut Jombart]

John Lande wrote:

>Dear R user,
>
>I am using Sweave to write my reports with R code. Unlucly my code take a
>lot of time to run, and I don't want to run it multiple time, if possible,
>as I am still developping the tools.
>
>It seems that a sweave run does not save the enviroment at the end of the
>process, is there a way to avoid to lunch multiple time the same commands?
>maybe it could be possible to store chunck of code results, and only call
>them in the next runs.
>
>thank you
>
>	[[alternative HTML version deleted]]
>
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>and provide commented, minimal, self-contained, reproducible code.
>
>
>  
>
Hi,

the package 'cacheSweave' seems to fulfil your needs.

Regards,

Thibaut.

-- 
######################################
Thibaut JOMBART
CNRS UMR 5558 - Laboratoire de Biométrie et Biologie Evolutive
Universite Lyon 1
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69622 Villeurbanne Cedex
Tél. : 04.72.43.29.35
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jombart at biomserv.univ-lyon1.fr
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