[R] package installation problem

[Robert M. Ullrey]

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Robin,

Thanks for the tip.

I already had gcc in my path, but also had to add the -lgfortran line  
in Makevars.

Worked as you said.

Cheers

Robert



On May 23, 2006, at 1:57 AM, Robin Hankin wrote:

> Hello everyone.
>
>
> After some very welcome offline advice, I now have the mvtnorm
> package working on R-2.3.0; here is my solution for
> MacOSX.
>
> There were two problems: first, make could not find gcc-4.0.
> To solve this, add the relevant directory to PATH.  For me, this is
>
> PATH=$PATH:/usr/local/gcc4.0/bin/
>
> Now the second problem is that the file for -lgfortran can't be found.
> To solve this, add
>
> FLIBS=-L/usr/local/gcc4.0/lib
>
> to the Makevars file.
>
>
>
> best wishes
>
>
> rksh
>
> On 23 May 2006, at 08:25, Robin Hankin wrote:
>
>> (this after asking the package author)
>>
>> Hi
>>
>> I cannot install the rmvnorm package under R-2.3.0, or R-2.3.1 beta.
>> It installs fine under R-2.2.1.
>>
>> transcript for installation under R-2.3.0 follows.
>>
>>
>> Robin-Hankins-Computer:~/scratch% R --version
>> R version 2.3.0 (2006-04-24)
>> Copyright (C) 2006 R Development Core Team
>>
>> R is free software and comes with ABSOLUTELY NO WARRANTY.
>> You are welcome to redistribute it under the terms of the
>> GNU General Public License.  For more information about
>> these matters, see http://www.gnu.org/copyleft/gpl.html.
>>
>> Robin-Hankins-Computer:~/scratch% sudo R CMD INSTALL
>> mvtnorm_0.7-2.tar.gz
>> * Installing *source* package 'mvtnorm' ...
>> ** libs
>> gfortran   -fPIC -fno-common  -g -O2 -c mvt.f -o mvt.o
>> gcc -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/
>> include -I/Library/Frameworks/R.framework/Resources/include  -I/sw/
>> include -I/usr/local/include   -fPIC -fno-common  -Wall -pedantic -O2
>> -std=gnu99 -c randomF77.c -o randomF77.o
>> gcc -flat_namespace -bundle -undefined suppress -L/sw/lib -L/usr/
>> local/lib -o mvtnorm.so mvt.o randomF77.o  -L/usr/local/gfortran/lib/
>> gcc/powerpc-apple-darwin8.2.0/4.1.0 -L/usr/local/gfortran/lib -
>> lgfortran -lgcc_s -lSystemStubs -lSystem -F/Library/Frameworks/
>> R.framework/.. -framework R
>> ** arch - i386
>> gfortran-4.0 -arch i386   -fPIC -fno-common  -g -O2 -march=pentium- 
>> m -
>> mtune=prescott -c mvt.f -o mvt.o
>> make: gfortran-4.0: Command not found
>> make: *** [mvt.o] Error 127
>> chmod: /Library/Frameworks/R.framework/Versions/2.3/Resources/ 
>> library/
>> mvtnorm/libs/i386/*: No such file or directory
>> ** arch - ppc
>> gfortran-4.0 -arch ppc   -fPIC -fno-common  -g -O2 -c mvt.f -o mvt.o
>> make: gfortran-4.0: Command not found
>> make: *** [mvt.o] Error 127
>> chmod: /Library/Frameworks/R.framework/Versions/2.3/Resources/ 
>> library/
>> mvtnorm/libs/ppc/*: No such file or directory
>> ERROR: compilation failed for package 'mvtnorm'
>> ** Removing '/Library/Frameworks/R.framework/Versions/2.3/Resources/
>> library/mvtnorm'
>> ** Restoring previous '/Library/Frameworks/R.framework/Versions/2.3/
>> Resources/library/mvtnorm'
>> Robin-Hankins-Computer:~/scratch%
>>
>>
>>
>>
>> anyone?
>>
>> --
>> Robin Hankin
>> Uncertainty Analyst
>> National Oceanography Centre, Southampton
>> European Way, Southampton SO14 3ZH, UK
>>   tel  023-8059-7743
>>
>> ______________________________________________
>> R-help at stat.math.ethz.ch mailing list
>> https://stat.ethz.ch/mailman/listinfo/r-help
>> PLEASE do read the posting guide! http://www.R-project.org/posting-
>> guide.html
>
> --
> Robin Hankin
> Uncertainty Analyst
> National Oceanography Centre, Southampton
> European Way, Southampton SO14 3ZH, UK
>   tel  023-8059-7743
>
> ______________________________________________
> R-help at stat.math.ethz.ch mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide! http://www.R-project.org/posting- 
> guide.html



- --
Robert M. Ullrey
Special Reportage for Crises Intervention and Mediation
Reportage Spécial pour des Crises Interposition et Médiation
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