[R] R[1304] general protection rip - Error running R file in Batch mode

[Srinivas Iyyer]

Hi group, 
I ran the file again and after 10 min. of run, the
process got interrupted.  

Here is the output of the file

$bash: R CMD BATCH grand.R > grand.log


 R CMD BATCH grand.R


/usr/local/lib64/R/bin/BATCH: line 55:  1758 Broken
pipe             ( echo "invisible(options(echo =
TRUE))"; cat ${in}; echo ''; echo "proc.time()" )
      1760 Segmentation fault      | ${R_HOME}/bin/R
${opts} >${out} 2>&1


Is this because of the excess query code in one .R
file?

Any suggestions, will help me .

thanks
Sri



> 
> I created a jumbo 100*54 = 5400 lines of code by
> replication. 
> 
> I saved this file as .R and ran it as:
> R CMD BATCH myfile.R..
> 
> The program ran for ~40 mins. ( each operation takes
> 5
> mins). after going home, I checked the stats and saw
> that the program got aborted leaving 8 output files
> in
> directory. 
> 
> I checked /var/log/messages and found :
> 
> localhost kernel: R[1304] general protection
> rip:2a988c919e rsp:7fbfff87f0 error:0
> 
> 
> postgres did not log any error message. 
> 
> This is my first time I am running my R code in
> BATCH
> mode. I am a new to programming in R and I have been
> working directly with R interface. 
> 
> Could any one guess what could have been the
> problem. 
> 
> Thanks
> Sri
> 
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