[R] about MCMC pack again...

[Mariagiulia Matteucci]

Hello, I am using Windows, I tried to use th File Search and also the
Windows Grep but I cannot find any file! In the list you showed me there
are some useful , I really don't know how can I find them! I tried in
the R folder, src folder, MCMC pack folder and I dowloaded the .tar file
about MCMC pack where there are the codes, I really don't know what to
do!

Mariagiulia


On Aug 11, 2006 10:51 AM, Barry Rowlingson
<B.Rowlingson at lancaster.ac.uk> wrote:

> Mariagiulia Matteucci wrote:
> > Hello, thank you very much for your previous answers about the C++
> > code.
> > I am interested in the application of the Gibbs Sampler in the IRT
> > models, so in the function MCMCirt1d and MCMCirtkd. I've found the
> > C++
> > source codes, as you suggested, but I cannot find anything about the
> > Gibbs Sampler. All the files are for the Metropolis algorithm.
> 
>   $ cd MCMCpack/
>   $ grep -ir gibbs .
> 
> produces loads of output, including:
> 
> ./src/MCMCfactanal.cc:    } // end Gibbs loop
> ./src/MCMChierEI.cc:// and slice sampling and Gibbs sampling to sample
> from the posterior
> ./src/MCMCirt1d.cc:    } // end Gibbs loop
> ./src/MCMCmixfactanal.cc:  // Gibbs Sampler //
> ./src/MCMCmixfactanal.cc:  } // end Gibbs loop
> ./src/MCMCoprobit.cc:    // Gibbs loop
> ./src/MCMCordfactanal.cc:  // Gibbs Sampler //
> ./src/MCMCpanel.cc:// simulate from posterior density and return a
> Gibbs
> by parameters matrix
> ./src/MCMCpanel.cc: const int* burnin, const int* gibbs, const
> int* thin,
> ./src/MCMCpanel.cc:   int Mgibbs = gibbs[0];
> ./src/MCMCpanel.cc:   int Mtotiter = Mburnin + Mgibbs;
> ./src/MCMCpanel.cc:   Matrix<double> beta_holder(Mgibbs/Mthin,Mp);
> ./src/MCMCpanel.cc:   Matrix<double> D_holder(Mgibbs/Mthin,Mq*Mq);
> ./src/MCMCpanel.cc:   Matrix<double> sigma2_holder(Mgibbs/Mthin, 1);
> ./src/MCMCpanel.cc:   // gibbs loop
> ./src/MCMCregress.cc:     // Gibbs sampler
> ./src/MCMCregress.cc:       // second set of Gibbs scans
> ./src/MCMCSVDreg.cc:    /////////////////// Gibbs sampler 
> ///////////////////
> 
>   Perhaps some of these are useful?
> 
> For your info, I know nothing about MCMCpack, I just know how to use
> grep to search for things. If you are on Windows, you can probably use
> the Windows File Explorer Search option to look for it. But give me
> grep
> anyday...
> 
> Barry
>