[R] Install the RMySQL

Mon Mar 14 22:10:19 CET 2005

Hi, I have some problem to install RMySQL package.
Could you help me?

I set up the path.

[root at ep2 library]# export PKG_CPPFLAGS="-I/var/lib/mysql"
[root at ep2 library]# export PKG_LIBS="-L/var/lib/mysql -
lmysqlclient"
[root at ep2 library]# R CMD INSTALL /home/younko/RMySQL_0.5-
5.tar.gz 

I got this bunch of error message.

Please help me.

* Installing *source* package 'RMySQL' ...
creating cache ./config.cache
checking how to run the C preprocessor... cc -E
checking for compress in -lz... yes
checking for getopt_long in -lc... yes
checking for mysql_init in -lmysqlclient... no
checking for mysql.h... no
updating cache ./config.cache
creating ./config.status
creating src/Makevars
** libs
gcc -I/usr/local/lib/R/include -I/var/lib/mysql -
I/usr/local/include   -fPIC  -g -O2 -c RS-DBI.c -o RS-DBI.o
gcc -I/usr/local/lib/R/include -I/var/lib/mysql -
I/usr/local/include   -fPIC  -g -O2 -c RS-MySQL.c -o RS-
MySQL.o
In file included from RS-MySQL.c:22:
RS-MySQL.h:40:19: mysql.h: No such file or directory
RS-MySQL.h:41:27: mysql_version.h: No such file or directory
RS-MySQL.h:42:23: mysql_com.h: No such file or directory
In file included from RS-MySQL.c:22:
RS-MySQL.h:109: `FIELD_TYPE_DECIMAL' undeclared here (not in 
a function)
RS-MySQL.h:109: initializer element is not constant
RS-MySQL.h:109: (near initialization for `RS_MySQL_dataTypes
[0].typeId')
RS-MySQL.h:109: initializer element is not constant
RS-MySQL.h:109: (near initialization for `RS_MySQL_dataTypes
[0]')
RS-MySQL.h:110: `FIELD_TYPE_TINY' undeclared here (not in a 
function)
RS-MySQL.h:110: initializer element is not constant
RS-MySQL.h:110: (near initialization for `RS_MySQL_dataTypes
[1].typeId')
RS-MySQL.h:110: initializer element is not constant
RS-MySQL.h:110: (near initialization for `RS_MySQL_dataTypes
[1]')
RS-MySQL.h:111: `FIELD_TYPE_SHORT' undeclared here (not in a 
function)
RS-MySQL.h:111: initializer element is not constant
RS-MySQL.h:111: (near initialization for `RS_MySQL_dataTypes
[2].typeId')
RS-MySQL.h:111: initializer element is not constant
RS-MySQL.h:111: (near initialization for `RS_MySQL_dataTypes
[2]')
RS-MySQL.h:112: `FIELD_TYPE_LONG' undeclared here (not in a 
function)
RS-MySQL.h:112: initializer element is not constant
RS-MySQL.h:112: (near initialization for `RS_MySQL_dataTypes
[3].typeId')
RS-MySQL.h:112: initializer element is not constant
RS-MySQL.h:112: (near initialization for `RS_MySQL_dataTypes
[3]')
RS-MySQL.h:113: `FIELD_TYPE_FLOAT' undeclared here (not in a 
function)
RS-MySQL.h:113: initializer element is not constant
RS-MySQL.h:113: (near initialization for `RS_MySQL_dataTypes
[4].typeId')
RS-MySQL.h:113: initializer element is not constant
RS-MySQL.h:113: (near initialization for `RS_MySQL_dataTypes
[4]')
RS-MySQL.h:114: `FIELD_TYPE_DOUBLE' undeclared here (not in 
a function)
RS-MySQL.h:114: initializer element is not constant
RS-MySQL.h:114: (near initialization for `RS_MySQL_dataTypes
[5].typeId')
RS-MySQL.h:114: initializer element is not constant
RS-MySQL.h:114: (near initialization for `RS_MySQL_dataTypes
[5]')
RS-MySQL.h:115: `FIELD_TYPE_NULL' undeclared here (not in a 
function)
RS-MySQL.h:115: initializer element is not constant
RS-MySQL.h:115: (near initialization for `RS_MySQL_dataTypes
[6].typeId')
RS-MySQL.h:115: initializer element is not constant
RS-MySQL.h:115: (near initialization for `RS_MySQL_dataTypes
[6]')
RS-MySQL.h:116: `FIELD_TYPE_TIMESTAMP' undeclared here (not 
in a function)
RS-MySQL.h:116: initializer element is not constant
RS-MySQL.h:116: (near initialization for `RS_MySQL_dataTypes
[7].typeId')
RS-MySQL.h:116: initializer element is not constant
RS-MySQL.h:116: (near initialization for `RS_MySQL_dataTypes
[7]')
RS-MySQL.h:117: `FIELD_TYPE_LONGLONG' undeclared here (not 
in a function)
RS-MySQL.h:117: initializer element is not constant
RS-MySQL.h:117: (near initialization for `RS_MySQL_dataTypes
[8].typeId')
RS-MySQL.h:117: initializer element is not constant
RS-MySQL.h:117: (near initialization for `RS_MySQL_dataTypes
[8]')
RS-MySQL.h:118: `FIELD_TYPE_INT24' undeclared here (not in a 
function)
RS-MySQL.h:118: initializer element is not constant
RS-MySQL.h:118: (near initialization for `RS_MySQL_dataTypes
[9].typeId')
RS-MySQL.h:118: initializer element is not constant
RS-MySQL.h:118: (near initialization for `RS_MySQL_dataTypes
[9]')
RS-MySQL.h:119: `FIELD_TYPE_DATE' undeclared here (not in a 
function)
RS-MySQL.h:119: initializer element is not constant
RS-MySQL.h:119: (near initialization for `RS_MySQL_dataTypes
[10].typeId')
RS-MySQL.h:119: initializer element is not constant
RS-MySQL.h:119: (near initialization for `RS_MySQL_dataTypes
[10]')
RS-MySQL.h:120: `FIELD_TYPE_TIME' undeclared here (not in a 
function)
RS-MySQL.h:120: initializer element is not constant
RS-MySQL.h:120: (near initialization for `RS_MySQL_dataTypes
[11].typeId')
RS-MySQL.h:120: initializer element is not constant
RS-MySQL.h:120: (near initialization for `RS_MySQL_dataTypes
[11]')
RS-MySQL.h:121: `FIELD_TYPE_DATETIME' undeclared here (not 
in a function)
RS-MySQL.h:121: initializer element is not constant
RS-MySQL.h:121: (near initialization for `RS_MySQL_dataTypes
[12].typeId')
RS-MySQL.h:121: initializer element is not constant
RS-MySQL.h:121: (near initialization for `RS_MySQL_dataTypes
[12]')
RS-MySQL.h:122: `FIELD_TYPE_YEAR' undeclared here (not in a 
function)
RS-MySQL.h:122: initializer element is not constant
RS-MySQL.h:122: (near initialization for `RS_MySQL_dataTypes
[13].typeId')
RS-MySQL.h:122: initializer element is not constant
RS-MySQL.h:122: (near initialization for `RS_MySQL_dataTypes
[13]')
RS-MySQL.h:123: `FIELD_TYPE_NEWDATE' undeclared here (not in 
a function)
RS-MySQL.h:123: initializer element is not constant
RS-MySQL.h:123: (near initialization for `RS_MySQL_dataTypes
[14].typeId')
RS-MySQL.h:123: initializer element is not constant
RS-MySQL.h:123: (near initialization for `RS_MySQL_dataTypes
[14]')
RS-MySQL.h:124: `FIELD_TYPE_ENUM' undeclared here (not in a 
function)
RS-MySQL.h:124: initializer element is not constant
RS-MySQL.h:124: (near initialization for `RS_MySQL_dataTypes
[15].typeId')
RS-MySQL.h:124: initializer element is not constant
RS-MySQL.h:124: (near initialization for `RS_MySQL_dataTypes
[15]')
RS-MySQL.h:125: `FIELD_TYPE_SET' undeclared here (not in a 
function)
RS-MySQL.h:125: initializer element is not constant
RS-MySQL.h:125: (near initialization for `RS_MySQL_dataTypes
[16].typeId')
RS-MySQL.h:125: initializer element is not constant
RS-MySQL.h:125: (near initialization for `RS_MySQL_dataTypes
[16]')
RS-MySQL.h:126: `FIELD_TYPE_TINY_BLOB' undeclared here (not 
in a function)
RS-MySQL.h:126: initializer element is not constant
RS-MySQL.h:126: (near initialization for `RS_MySQL_dataTypes
[17].typeId')
RS-MySQL.h:126: initializer element is not constant
RS-MySQL.h:126: (near initialization for `RS_MySQL_dataTypes
[17]')
RS-MySQL.h:127: `FIELD_TYPE_MEDIUM_BLOB' undeclared here 
(not in a function)
RS-MySQL.h:127: initializer element is not constant
RS-MySQL.h:127: (near initialization for `RS_MySQL_dataTypes
[18].typeId')
RS-MySQL.h:127: initializer element is not constant
RS-MySQL.h:127: (near initialization for `RS_MySQL_dataTypes
[18]')
RS-MySQL.h:128: `FIELD_TYPE_LONG_BLOB' undeclared here (not 
in a function)
RS-MySQL.h:128: initializer element is not constant
RS-MySQL.h:128: (near initialization for `RS_MySQL_dataTypes
[19].typeId')
RS-MySQL.h:128: initializer element is not constant
RS-MySQL.h:128: (near initialization for `RS_MySQL_dataTypes
[19]')
RS-MySQL.h:129: `FIELD_TYPE_BLOB' undeclared here (not in a 
function)
RS-MySQL.h:129: initializer element is not constant
RS-MySQL.h:129: (near initialization for `RS_MySQL_dataTypes
[20].typeId')
RS-MySQL.h:129: initializer element is not constant
RS-MySQL.h:129: (near initialization for `RS_MySQL_dataTypes
[20]')
RS-MySQL.h:130: `FIELD_TYPE_VAR_STRING' undeclared here (not 
in a function)
RS-MySQL.h:130: initializer element is not constant
RS-MySQL.h:130: (near initialization for `RS_MySQL_dataTypes
[21].typeId')
RS-MySQL.h:130: initializer element is not constant
RS-MySQL.h:130: (near initialization for `RS_MySQL_dataTypes
[21]')
RS-MySQL.h:131: `FIELD_TYPE_STRING' undeclared here (not in 
a function)
RS-MySQL.h:131: initializer element is not constant
RS-MySQL.h:131: (near initialization for `RS_MySQL_dataTypes
[22].typeId')
RS-MySQL.h:131: initializer element is not constant
RS-MySQL.h:131: (near initialization for `RS_MySQL_dataTypes
[22]')
RS-MySQL.h:132: initializer element is not constant
RS-MySQL.h:132: (near initialization for `RS_MySQL_dataTypes
[23]')
RS-MySQL.c:25: `MYSQL_SERVER_VERSION' undeclared here (not 
in a function)
RS-MySQL.c: In function `RS_MySQL_init':
RS-MySQL.c:73: warning: initialization makes pointer from 
integer without a cast
RS-MySQL.c: In function `RS_MySQL_newConnection':
RS-MySQL.c:189: `MYSQL' undeclared (first use in this 
function)
RS-MySQL.c:189: (Each undeclared identifier is reported only 
once
RS-MySQL.c:189: for each function it appears in.)
RS-MySQL.c:189: `my_connection' undeclared (first use in 
this function)
RS-MySQL.c:238: `MYSQL_READ_DEFAULT_GROUP' undeclared (first 
use in this function)
RS-MySQL.c: In function `RS_MySQL_closeConnection':
RS-MySQL.c:370: `MYSQL' undeclared (first use in this 
function)
RS-MySQL.c:370: `my_connection' undeclared (first use in 
this function)
RS-MySQL.c:386: parse error before ')' token
RS-MySQL.c: In function `RS_MySQL_exec':
RS-MySQL.c:411: `MYSQL' undeclared (first use in this 
function)
RS-MySQL.c:411: `my_connection' undeclared (first use in 
this function)
RS-MySQL.c:412: `MYSQL_RES' undeclared (first use in this 
function)
RS-MySQL.c:412: `my_result' undeclared (first use in this 
function)
RS-MySQL.c:418: parse error before ')' token
RS-MySQL.c:457: parse error before ')' token
RS-MySQL.c: In function `RS_MySQL_createDataMappings':
RS-MySQL.c:496: `MYSQL_RES' undeclared (first use in this 
function)
RS-MySQL.c:496: `my_result' undeclared (first use in this 
function)
RS-MySQL.c:497: `MYSQL_FIELD' undeclared (first use in this 
function)
RS-MySQL.c:497: `select_dp' undeclared (first use in this 
function)
RS-MySQL.c:505: parse error before ')' token
RS-MySQL.c:511: `MYSQL' undeclared (first use in this 
function)
RS-MySQL.c:511: parse error before ')' token
RS-MySQL.c:546: `FIELD_TYPE_VAR_STRING' undeclared (first 
use in this function)
RS-MySQL.c:547: `FIELD_TYPE_STRING' undeclared (first use in 
this function)
RS-MySQL.c:551: `FIELD_TYPE_TINY' undeclared (first use in 
this function)
RS-MySQL.c:552: `FIELD_TYPE_SHORT' undeclared (first use in 
this function)
RS-MySQL.c:553: `FIELD_TYPE_INT24' undeclared (first use in 
this function)
RS-MySQL.c:554: `FIELD_TYPE_LONG' undeclared (first use in 
this function)
RS-MySQL.c:556: `UNSIGNED_FLAG' undeclared (first use in 
this function)
RS-MySQL.c:561: `FIELD_TYPE_LONGLONG' undeclared (first use 
in this function)
RS-MySQL.c:566: `FIELD_TYPE_DECIMAL' undeclared (first use 
in this function)
RS-MySQL.c:572: `FIELD_TYPE_FLOAT' undeclared (first use in 
this function)
RS-MySQL.c:573: `FIELD_TYPE_DOUBLE' undeclared (first use in 
this function)
RS-MySQL.c:576: `FIELD_TYPE_BLOB' undeclared (first use in 
this function)
RS-MySQL.c:577: `FIELD_TYPE_TINY_BLOB' undeclared (first use 
in this function)
RS-MySQL.c:578: `FIELD_TYPE_MEDIUM_BLOB' undeclared (first 
use in this function)
RS-MySQL.c:579: `FIELD_TYPE_LONG_BLOB' undeclared (first use 
in this function)
RS-MySQL.c:583: `FIELD_TYPE_DATE' undeclared (first use in 
this function)
RS-MySQL.c:584: `FIELD_TYPE_TIME' undeclared (first use in 
this function)
RS-MySQL.c:585: `FIELD_TYPE_DATETIME' undeclared (first use 
in this function)
RS-MySQL.c:586: `FIELD_TYPE_YEAR' undeclared (first use in 
this function)
RS-MySQL.c:587: `FIELD_TYPE_NEWDATE' undeclared (first use 
in this function)
RS-MySQL.c:591: `FIELD_TYPE_ENUM' undeclared (first use in 
this function)
RS-MySQL.c:595: `FIELD_TYPE_SET' undeclared (first use in 
this function)
RS-MySQL.c: In function `RS_MySQL_fetch':
RS-MySQL.c:620: `MYSQL_RES' undeclared (first use in this 
function)
RS-MySQL.c:620: `my_result' undeclared (first use in this 
function)
RS-MySQL.c:621: `MYSQL_ROW' undeclared (first use in this 
function)
RS-MySQL.c:621: parse error before "row"
RS-MySQL.c:658: parse error before ')' token
RS-MySQL.c:676: `row' undeclared (first use in this function)
RS-MySQL.c:681: `MYSQL' undeclared (first use in this 
function)
RS-MySQL.c:681: parse error before ')' token
RS-MySQL.c:685: warning: assignment makes pointer from 
integer without a cast
RS-MySQL.c: In function `RS_MySQL_getException':
RS-MySQL.c:789: `MYSQL' undeclared (first use in this 
function)
RS-MySQL.c:789: `my_connection' undeclared (first use in 
this function)
RS-MySQL.c:809: parse error before ')' token
RS-MySQL.c:811: warning: passing arg 1 of `Rf_mkChar' makes 
pointer from integer without a cast
RS-MySQL.c: In function `RS_MySQL_closeResultSet':
RS-MySQL.c:822: `MYSQL_RES' undeclared (first use in this 
function)
RS-MySQL.c:822: `my_result' undeclared (first use in this 
function)
RS-MySQL.c:827: parse error before ')' token
RS-MySQL.c:830: `MYSQL_ROW' undeclared (first use in this 
function)
RS-MySQL.c:830: parse error before "row"
RS-MySQL.c:831: `row' undeclared (first use in this function)
RS-MySQL.c: In function `RS_MySQL_managerInfo':
RS-MySQL.c:900: warning: passing arg 1 of `Rf_mkChar' makes 
pointer from integer without a cast
RS-MySQL.c: In function `RS_MySQL_connectionInfo':
RS-MySQL.c:910: `MYSQL' undeclared (first use in this 
function)
RS-MySQL.c:910: `my_con' undeclared (first use in this 
function)
RS-MySQL.c:925: parse error before ')' token
RS-MySQL.c:939: warning: passing arg 1 of `Rf_mkChar' makes 
pointer from integer without a cast
RS-MySQL.c:940: warning: passing arg 1 of `Rf_mkChar' makes 
pointer from integer without a cast
RS-MySQL.c: In function `RS_MySQL_dbApply':
RS-MySQL.c:1158: `MYSQL_RES' undeclared (first use in this 
function)
RS-MySQL.c:1158: `my_result' undeclared (first use in this 
function)
RS-MySQL.c:1159: `MYSQL_ROW' undeclared (first use in this 
function)
RS-MySQL.c:1159: parse error before "row"
RS-MySQL.c:1184: `row' undeclared (first use in this 
function)
RS-MySQL.c:1233: parse error before ')' token
RS-MySQL.c:1258: `MYSQL' undeclared (first use in this 
function)
RS-MySQL.c:1258: parse error before ')' token
RS-MySQL.c:1264: warning: assignment makes pointer from 
integer without a cast
make: *** [RS-MySQL.o] Error 1
ERROR: compilation failed for package 'RMySQL'

========================
Younhee Ko(younko at uiuc.edu)

http://comedu.korea.ac.kr/~unygo
contact : 217-417-4868
Graduate Student in Dept. of Computer Science
University of Illinois at Urbana-Champaign