[R] RdbiPgSQL and POSIXct
Miha STAUT
mihastaut at hotmail.com
Wed Dec 10 08:08:57 CET 2003
Hi,
Does the Bioconductor library RdbiPgSQL support the POSIXlt and POSIXct (R
time format)?. I tried to import an R data frame which had also some columns
of class POSIXct into PostgreSQL 7.2.1 with the command dbWriteTable without
success.
>str(jame)
`data.frame': 8123 obs. of 27 variables:
$ kat.st : int 1 2 3 4 5 6 7 8 9 10 ...
$ ime : Factor w/ 7867 levels "1133 VG","2202 VG",..: 7788 2605
4387 4932 5246 5121 3584 3721 3552 4521 ...
$ sinonim : Factor w/ 1385 levels "","7P2","7P4",..: 1 1 863 1 935 1286
1 1 1 798 ...
$ tip1 : num 4.3 1.2 5.2 5.2 5.3 4.2 5.6 NA 5.5 5.3 ...
$ tip2 : num NA NA NA NA NA NA NA NA NA NA ...
$ x : int 5129740 5127853 5113656 5113664 5113120 5113630
5088530 5089000 5087400 5086256 ...
$ y : int 5408790 5411028 5443482 5443450 5446130 5446030
5443880 5447000 5442150 5446013 ...
$ x.lj : int 5129740 5127840 5113660 5113660 5113120 5113490
5088520 5088000 5087400 5086240 ...
$ y.lj : int 5408790 5411000 5443480 5443450 5446130 5446100
5443880 5447000 5442150 5445980 ...
$ tk.25 : Factor w/ 159 levels "Ajdov¹èina","Ba..",..: 116 116 56 56
56 56 149 149 149 149 ...
$ ttn : Factor w/ 1051 levels "Ajdov¹èina 1",..: 890 65 849 849 851
851 984 985 991 993 ...
$ lega.po : Factor w/ 11 levels "","GPS","teodol..",..: 7 10 11 11 10 4
4 1 7 11 ...
$ ko : Factor w/ 837 levels "","Adle¹ièi",..: 633 633 588 588 657
657 772 743 130 743 ...
$ upravna.enota: Factor w/ 54 levels "Ajdov¹èina","Br..",..: 34 34 43 43 43
43 52 52 26 52 ...
$ dolzina : int 95 442 360 60 112 450 160 NA 23 130 ...
$ globina : int 10 208 37 8 28 58 131 NA 23 42 ...
$ datum.obis :`POSIXct', format: chr "1925-07-11" "1958-08-01"
"1925-07-26" "1925-07-26" ...
$ datum.zap :`POSIXct', format: chr NA NA NA NA ...
$ org : Factor w/ 213 levels "","Anthron","Ar..",..: 76 179 76 76
76 76 76 76 76 76 ...
$ udelezenci : Factor w/ 3826 levels "","Abrahamsberg..",..: 2092 2722
1184 1185 1427 1183 1426 2585 1909 10 ...
$ zapisnikar : Factor w/ 589 levels "","Abrahamsberg..",..: 1 1 1 1 1 1 1
345 345 345 ...
$ opombe : Factor w/ 749 levels "","10","10t",..: 565 565 308 308 1 1
318 31 28 308 ...
$ kat.st.VG : int NA NA NA NA NA NA NA NA NA NA ...
$ datum.vnosa :`POSIXct', format: chr "1990-09-18" "1990-09-19"
"1993-03-01" "1990-09-18" ...
$ xpop : num 129740 127853 113656 113664 113120 ...
$ ypop : num 408790 411028 443482 443450 446130 ...
$ nv : int 1525 650 780 780 451 439 497 470 483 634 ...
>dbWriteTable(conn,jame,"j")
The same command produced a good result with the date columns transformed to
factor.
THE ERROR MESSAGE
NOTICE: current transaction is aborted, queries ignored until end of
transaction block # the same error message repeated many times (I guess
length(jame$x))
Thanks in advance, Miha Staut
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