[R] lookup function for density(...) objects
Bob Wheeler
bwheeler at echip.com
Sat May 12 14:58:40 CEST 2001
Well if that sort of thing is what is wanted,
using a Johnson or Pearson system fit may also be
useful. Functions for the Johnson system are
available in the package SuppDists.
Ross Ihaka wrote:
>
> Martin Maechler pointed out to me that you wanted the cumulative
> probabilities. Here is a quick and dirty solution.
>
> # Given a kernel density estimate, this function
> # carries out a (very quick and dirty) numerical
> # integration, and then fits a spline to get a function
> # which can be used to look up cumulative probabilities.
>
> smoothed.df <-
> function(d)
> {
> F <- cumsum(d$y)
> F <- F/F[length(F)]
> splinefun(d$x, F)
> }
>
> # Generate a bimodal test distribution
> # Estimate the desnsity and distribution function
> x <- rnorm(1000) + ifelse(runif(1000) > .5, -3, 3)
> d <- density(x)
> F <- smoothed.df(d) # F returns cumulative probs
>
> # Plot the true and estimated distribution function
> curve(0.5 * dnorm(x, -3) + 0.5 * dnorm(x, 3), col="red")
> lines(d)
>
> # Plot the true and estimated distribution function
> F <- smoothed.d
> curve(F(x), add=TRUE)
>
> --
> Ross Ihaka Email: ihaka at stat.auckland.ac.nz
> Department of Statistics Phone: (64-9) 373-7599 x 5054
> University of Auckland Fax: (64-9) 373-7018
> Private Bag 92019, Auckland
> New Zealand
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--
Bob Wheeler --- (Reply to: bwheeler at echip.com)
ECHIP, Inc.
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