[BioC] recommend package for exon array analysis

[James W. MacDonald]

You can use either oligo or xps for these arrays.

Best,

Jim



On Tuesday, March 18, 2014 4:21:55 PM, Dli [guest] wrote:
>
> Dear Community,
>
> I recently need to analysis batch of Mouse Exon ST 1.0 array, I have been tried to search existed packages for process this kind of data. There is a paper "Comprehensive Analysis of Affymetrix Exon Arrays Using BioConductor" descried the package 'exonmap' seems no longer being supported. Did anyone have some suggestions? Thanks in advance.
>
> Best.
>
>   -- output of sessionInfo():
>
> I am using R 3.0.1 in MacOSX.
>
> --
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--
James W. MacDonald, M.S.
Biostatistician
University of Washington
Environmental and Occupational Health Sciences
4225 Roosevelt Way NE, # 100
Seattle WA 98105-6099