[BioC] Rbowtie - compilation error

[Martin Morgan]

Please remember to include the package maintainer in mail about individual 
packages. The maintainer is available from the package 'landing page'

   http://bioconductor.org/packages/release/bioc/html/Rbowtie.html

and is cc'd here.

There is another Rbowtie issue reported on StackOverflow

    http://stackoverflow.com/questions/24016722

and

   https://stat.ethz.ch/pipermail/bioconductor/2014-June/059913.html

On 06/04/2014 12:20 AM, Romain [guest] wrote:
> Hi,
>
> I'm trying to install "Rbowtie" package, following the instructions here : http://bioconductor.org/packages/2.12/bioc/html/Rbowtie.html
>
> When I run the command, I got this error message :
> http://pastebin.com/DkEdCV05
>
> I'm currently running on Ubuntu 12.4 LTS and all others packages seems to work well. I updated gcc and g++ to the last version aviable.
> May you help me to identify the problem ?
>
> Thanks.
>
>   -- output of sessionInfo():
>
> R version 3.1.0 (2014-04-10)
> Platform: i686-pc-linux-gnu (32-bit)
>
> locale:
>   [1] LC_CTYPE=fr_FR.UTF-8       LC_NUMERIC=C
>   [3] LC_TIME=fr_FR.UTF-8        LC_COLLATE=fr_FR.UTF-8
>   [5] LC_MONETARY=fr_FR.UTF-8    LC_MESSAGES=fr_FR.UTF-8
>   [7] LC_PAPER=fr_FR.UTF-8       LC_NAME=C
>   [9] LC_ADDRESS=C               LC_TELEPHONE=C
> [11] LC_MEASUREMENT=fr_FR.UTF-8 LC_IDENTIFICATION=C
>
> attached base packages:
> [1] stats     graphics  grDevices utils     datasets  methods   base
>
> other attached packages:
> [1] BiocInstaller_1.14.2
>
> loaded via a namespace (and not attached):
> [1] tools_3.1.0
>
>
> --
> Sent via the guest posting facility at bioconductor.org.
>
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