[BioC] older version of org.Hs.eg.db
1frcn at ist-einmalig.de
1frcn at ist-einmalig.de
Wed Apr 16 14:19:56 CEST 2014
Hi dan,
thanks a lot for your answer! This would have been perfekt - unfortunally it
didn't help cause we're using our own R-packages and they aren't compatible
with older R versions and the older version of org.Hs.eg.db isn't working
with the new R version. -.-
So I guess I've to check my programm again and see if I can find a
mistake...
Thanks again,
1frcn
Gesendet: Mittwoch, 16. April 2014 um 13:42 Uhr
Von: "Dan Du" <tooyoung at gmail.com>
An: "1frcn [guest]" <guest at bioconductor.org>
Cc: bioconductor at r-project.org, 1frcn at ist-einmalig.de
Betreff: Re: [BioC] older version of org.Hs.eg.db
Hi 1frcn,
this one should be close enough,
[1]http://bioconductor.org/packages/2.7/data/annotation/html/org.Hs.eg.db.ht
ml
with a time stamp "Packaged: 2010-10-04 18:33:30 UTC; mcarlson",
while there is no guarantee that this will match to the one GeneTrail
was using.
Best,
dan
On Wed, 2014-04-16 at 04:12 -0700, 1frcn [guest] wrote:
> Hi all,
>
> Hopefully this is the right mailinglist for my problem:
> I'm searching for an older version of the data-package org.Hs.eg.db. More
exactly: a version of september 2010
>
> I compared a programms output I got in R with the output of GeneTrail (an
online Tool). GeneTrail uses a database version from 2010-09-02. I'm getting
different outputs and was wondering if I made a mistake in my programm or if
it's just because of the different versions of the data. To exclude the 2nd
point I need that older version. I searched for it on the Bioconductor page
but couldn't find it.
>
> Thanking you for your help in anticipation.
> 1frcn
>
> -- output of sessionInfo():
>
> R version 3.0.2 (2013-09-25)
> Platform: x86_64-w64-mingw32/x64 (64-bit)
>
> locale:
> [1] LC_COLLATE=German_Germany.1252 LC_CTYPE=German_Germany.1252
> [3] LC_MONETARY=German_Germany.1252 LC_NUMERIC=C
> [5] LC_TIME=German_Germany.1252
>
> attached base packages:
> [1] stats graphics grDevices utils datasets methods base
>
>
> --
> Sent via the guest posting facility at bioconductor.org.
>
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References
1. http://bioconductor.org/packages/2.7/data/annotation/html/org.Hs.eg.db.html
2. https://stat.ethz.ch/mailman/listinfo/bioconductor
3. http://news.gmane.org/gmane.science.biology.informatics.conductor
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