[BioC] Using easyRNASeq package: question about BAM/BAI and links to them

Nicolas Delhomme nicolas.delhomme at umu.se
Tue Nov 26 20:35:37 CET 2013


Right. It was also fetching the bam.bai files. Should have seen that.

Cheers,

Nico
---------------------------------------------------------------
Nicolas Delhomme

Nathaniel Street Lab
Department of Plant Physiology
Umeå Plant Science Center

Tel: +46 90 786 7989
Email: nicolas.delhomme at umu.se
SLU - Umeå universitet
Umeå S-901 87 Sweden
---------------------------------------------------------------

On 26 Nov 2013, at 20:07, Sylvain Foisy Ph. D. <sylvain.foisy at diploide.net> wrote:

> Hi Nicolas,
> 
> I found my problem with Martin's help ;-) My regex for the pattern was wrong: I should have used *_accepted_hits.bam$ instead of *_accepted_hits.bam*...
> 
> Best regards
> 
> S
> 
> 



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