[BioC] Generating GEO submission files from beadarray summary data
Aliaksei Holik
salvador at bio.bsu.by
Fri Nov 15 14:04:38 CET 2013
Hi Mark,
I certainly could send the code, but I'm not sure it'd be much use. It's
a heavily patched version of your code, meddled with to get it to work
with my data. Not sure if that's what you'd expect.
Aliaksei.
On 15/11/2013 19:14, Mark Dunning wrote:
> I'd be glad to add the function to beadarray. Could you send me the code
> Aliaksei?
>
> Best,
>
> Mark
>
>
> On Thu, Nov 14, 2013 at 9:57 PM, Kemal Akat <kakat at mail.rockefeller.edu
> <mailto:kakat at mail.rockefeller.edu>> wrote:
>
> Hi Aliaksei,
>
> That would be great. Thanks.
>
> I think it could be useful and if I recall correctly Mark or one of
> the other others suggest to include it into the beadarray package.
> Though, most of the users crave for RNA-seq tools I guess.
>
> Best,
> Kemal
>
>
> On Nov 14, 2013, at 4:39 PM, Aliaksei Holik <salvador at bio.bsu.by
> <mailto:salvador at bio.bsu.by>>
> wrote:
>
> > Hi Kemal,
> >
> > Mark's code needed some modifications, but I did manage to get it
> to work. I'll send you both the original code and the one with
> modifications.
> >
> > I wonder if it's worth making it into a package and what that
> would involve.
> >
> > All the best,
> >
> > Aliaksei.
> >
> > On 15/11/13 3:48 AM, Kemal Akat wrote:
> >> Hi all,
> >>
> >> It's an older post, but can anyone still provide the code
> Aliaksei and Mark were talking about?
> >>
> >> Thank you.
> >>
> >> Kemal
> >>
> >> https://stat.ethz.ch/pipermail/bioconductor/2012-October/048439.html
> >>
>
>
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