[BioC] Limma and XML

[Gordon K Smyth]

Dear Wei Chen,

I have never read an XML file into R, but a google search tells me that

"The XML package provides general facilities for reading and writing XML 
documents within R."

If the XML files are converted into data frames, then the information can 
be input to limma.

Best wishes
Gordon

> Date: Thu, 10 Jan 2013 15:10:31 +0000
> From: "Chen, Wei" <chenw at karmanos.org>
> To: "'bioconductor at stat.math.ethz.ch'"
> 	<bioconductor at stat.math.ethz.ch>
> Subject: [BioC] Limma and XML
>
> Dear all,
>
> Is there an easy way to read 300 Imagene files in XML format to Limma? 
> Your help is highly appreciated.
>
> Sincerely,
>
> Wei Chen, PhD
> Assistant Professor
> Biostatistics Core, Karmanos Cancer Institute
> Department of Oncology, School of Medicine
> Wayne State University
> 87 E Canfield, 4th floor
> Detroit, MI 48201
> Phone: (313) 576-8655
> Fax: (313) 576-8656
> E-mail: chenw at karmanos.org
> Better treatments. Better outcomes.
>

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