[BioC] RankAggreg package

Taraka Ramji M [guest] guest at bioconductor.org
Thu Jan 3 18:37:48 CET 2013


i have list of miRNA targets predicted from 6 different tools ranked respectively. I have used the package RankAggreg to come up with best predictions. when i have given 500 targets, the program simple getting hanged. Kindly help me out to use this package efficiently. 

 -- output of sessionInfo(): 

R version 2.12.0 (2010-10-15)
Platform: x86_64-unknown-linux-gnu (64-bit)

locale:
 [1] LC_CTYPE=en_US.UTF-8    LC_NUMERIC=C            LC_TIME=en_IN          
 [4] LC_COLLATE=en_US.UTF-8  LC_MONETARY=C           LC_MESSAGES=en_US.UTF-8
 [7] LC_PAPER=en_IN          LC_NAME=C               LC_ADDRESS=C           
[10] LC_TELEPHONE=C          LC_MEASUREMENT=en_IN    LC_IDENTIFICATION=C    

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] RankAggreg_0.4-3 clValid_0.6-4    class_7.3-5      cluster_1.14.3  
[5] gtools_2.7.0

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