[BioC] how to adjust p-value in edgeR
wang peter
wng.peter at gmail.com
Thu Sep 27 17:46:23 CEST 2012
DEAR all:
i got the test result by such coding
et <- exactTest(d, pair=c("c0h","t0h"), dispersion="tagwise")
usually should use topTags to adjust the p value, but it canot sort.by
gene id or names
result <- topTags(et, n=dim(d)[1], adjust.method="BH", sort.by="p.value")
i want to use et$table, but donot know how to adjust its p-value
thank you very much
--
shan gao
Room 231(Dr.Fei lab)
Boyce Thompson Institute
Cornell University
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