[BioC] GO term enrichment

[Marc Carlson]

Hi Ludwig,

I have found the goseq package to be useful for this.

http://www.bioconductor.org/help/bioc-views/release/bioc/html/goseq.html


 Marc



On 02/25/2011 07:38 AM, Ludwig Eichinger wrote:
> Dear colleagues,
>
> we would like to analyse gene ontology term enrichment for a RNAseq
> experiment of human cells. Can we do this with bioconductor (which R
> version do we need) and if yes, how can we do it?
>
> Thank you very much for your advice.
>
> Best regards
>
> Ludwig Eichinger
>
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> Centre for Biochemistry
> Medical Faculty
> University of Cologne
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