[BioC] heatmap.2 ..help..how to cluster column ..but not Rows..
Saurin D. Jani
saurin_jani at yahoo.com
Fri Apr 15 03:49:23 CEST 2011
Hi BioC,
This must be simple but somehow I can not be able to do it...
How can I cluster samples only.. below code is giving me dendrogram on both rows and clumns...! if I do Rowv = FALSE..then I don't see any colors and KEY.
Please see this:
FeatureX is Matrix with proper rows and colmns.
row.dist <- as.dist(1 - cor(t(FeatureX)));
col.dist <- as.dist(1 - cor(FeatureX));
heatmap.2(FeatureX,col=bluered,Colv = as.dendrogram(hclust(col.dist, method = "centroid")), scale = "none",key = TRUE,density.info = "none",tracecol="black");
Thank you in advance,
Saurin
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