[BioC] Script to save plots in Pdf format ( DNAcopy)

Nathalie Conte nac at sanger.ac.uk
Wed Apr 6 12:45:16 CEST 2011


dear All,
I am  using the DNA copy package to get my CGH files (Agilent 244K 
arrays) analysed.
I am using this command to plot them one by one :
 >plot(CNA.object, plot.type="w")
This is a very slow and time consuming process and I have ~60 files to 
plot . I am quite novice in R and was wondering whether anybody could 
advise on a simple script to get all files  plotted and the plots saved 
into a single pdf file ( or nay other format)?
Many thanks in advance for any advice,

Nathalie


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