[BioC] problems when trying to use biomaRt

Sean Davis seandavi at gmail.com
Wed Mar 17 11:20:57 CET 2010


On Wed, Mar 17, 2010 at 6:12 AM, Juan Pablo Fededa <jpfededa at gmail.com> wrote:
> Dear bioconductor-help contributors,
>
>
> I'm trying to use biomaRt package in R, and when I run the last one of the
> next two lines, the R GUI crashes:
>
> library("biomaRt")
> ensembl = useMart("ensembl", dataset = "hsapiens_gene_ensembl")
>
> I'm using R 2.10.1 and the latest versions of biomaRt, XML ( downloaded from
> CRAN-extras) and RCurl.
> Do you have any idea of what can I change to make it work?

Hi, Juan.  There is not enough information here to help you.  Please
include the error message if you can and the output of sessionInfo()
after loading biomaRt.

Sean



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