[BioC] Unable to install Rgraphviz

Kasper Daniel Hansen khansen at stat.berkeley.edu
Mon Jun 29 09:16:09 CEST 2009


Graphvis 2.24 is a new release (very recent). I have however checked  
that on my machine (OS X Leopard), Rgraphviz and Graphviz 2.24 plays  
well together.

Please give us all of the output from the Rgraphviz installation  
attempt.

Kasper

On Jun 27, 2009, at 1:45 , anupam sinha wrote:

> Hi all,
>         I am trying to install *Rgraphviz *on an RHEL5 system. But  
> it keeps
> on giving the following error:
> *
>> source("http://bioconductor.org/biocLite.R")
>>    biocLite("Rgraphviz")*
>
>
> *make: *** [LL_funcs.o] Error 1
> ERROR: compilation failed for package ‘Rgraphviz’
> **
> *I have already installed graphviz-2.24.0*. *
>
> *> sessionInfo()
> R version 2.9.0 (2009-04-17)
> x86_64-redhat-linux-gnu
>
> locale:
> LC_CTYPE 
> = 
> en_US 
> .UTF 
> -8 
> ;LC_NUMERIC 
> = 
> C 
> ;LC_TIME 
> = 
> en_US 
> .UTF 
> -8 
> ;LC_COLLATE 
> = 
> en_US 
> .UTF 
> -8 
> ;LC_MONETARY 
> = 
> C 
> ;LC_MESSAGES 
> = 
> en_US 
> .UTF 
> -8 
> ;LC_PAPER 
> = 
> en_US 
> .UTF 
> -8 
> ;LC_NAME 
> = 
> C 
> ;LC_ADDRESS 
> =C;LC_TELEPHONE=C;LC_MEASUREMENT=en_US.UTF-8;LC_IDENTIFICATION=C
>
> attached base packages:
> [1] stats     graphics  grDevices utils     datasets  methods   base
>
> loaded via a namespace (and not attached):
> [1] tcltk_2.9.0 tools_2.9.0
>
>
> *Any help is appreciated.
>
> Regards,
>
> Anupam Sinha*
> *
>
> 	[[alternative HTML version deleted]]
>
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