[BioC] Unable to install Rgraphviz
Kasper Daniel Hansen
khansen at stat.berkeley.edu
Mon Jun 29 09:16:09 CEST 2009
Graphvis 2.24 is a new release (very recent). I have however checked
that on my machine (OS X Leopard), Rgraphviz and Graphviz 2.24 plays
well together.
Please give us all of the output from the Rgraphviz installation
attempt.
Kasper
On Jun 27, 2009, at 1:45 , anupam sinha wrote:
> Hi all,
> I am trying to install *Rgraphviz *on an RHEL5 system. But
> it keeps
> on giving the following error:
> *
>> source("http://bioconductor.org/biocLite.R")
>> biocLite("Rgraphviz")*
>
>
> *make: *** [LL_funcs.o] Error 1
> ERROR: compilation failed for package Rgraphviz
> **
> *I have already installed graphviz-2.24.0*. *
>
> *> sessionInfo()
> R version 2.9.0 (2009-04-17)
> x86_64-redhat-linux-gnu
>
> locale:
> LC_CTYPE
> =
> en_US
> .UTF
> -8
> ;LC_NUMERIC
> =
> C
> ;LC_TIME
> =
> en_US
> .UTF
> -8
> ;LC_COLLATE
> =
> en_US
> .UTF
> -8
> ;LC_MONETARY
> =
> C
> ;LC_MESSAGES
> =
> en_US
> .UTF
> -8
> ;LC_PAPER
> =
> en_US
> .UTF
> -8
> ;LC_NAME
> =
> C
> ;LC_ADDRESS
> =C;LC_TELEPHONE=C;LC_MEASUREMENT=en_US.UTF-8;LC_IDENTIFICATION=C
>
> attached base packages:
> [1] stats graphics grDevices utils datasets methods base
>
> loaded via a namespace (and not attached):
> [1] tcltk_2.9.0 tools_2.9.0
>
>
> *Any help is appreciated.
>
> Regards,
>
> Anupam Sinha*
> *
>
> [[alternative HTML version deleted]]
>
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