[BioC] Fixes to limma treat() function
Laurent Gautier
laurent at cbs.dtu.dk
Mon Jun 15 16:54:44 CEST 2009
Nice.
Thanks for the quick fix.
I will be waiting for the builds to appear on the bioconductor
repositories.
L.
> I've committed a major bug fix to the treat() function of the limma
> package. Users of this function should re-install limma 2.18.2 or 2.19.2
> from Bioconductor.
>
> I've introduced a new function topTreat(). Here's an example calling
> sequence:
>
> fit <- lmFit(y, design)
> fit <- treat(fit, lfc=0.1)
> topTreat(fit, coef=2)
>
> Best wishes
> Gordon
>
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