[BioC] IRanges problem:  ranges (overlap (range.1,	range.2)) does not seem to work
    Paul Shannon 
    pshannon at systemsbiology.org
       
    Mon Jun  8 19:43:23 CEST 2009
    
    
  
Reading in ?RangesMatching-class  that
   'To get the actual regions of intersection between the overlapping  
ranges, use the 'ranges' accessor'
But in my possibly naive or mistaken use, it does not seem to work:
     range.1 = IRanges (start = c (10, 20), end = c (15, 23))
     range.2 = IRanges (start = c (13, 19), end = c (18, 25))
     overlap.12 = overlap (range.1, range.2)
     ranges (overlap.12)
        Error in is(query, "Ranges") :
          element 1 is empty;
          the part of the args list of 'class' being evaluated was:
          (object)
Any advice?  Thanks!
  - Paul
sessionInfo ()
R version 2.9.0 (2009-04-17)
x86_64-unknown-linux-gnu
locale:
LC_CTYPE 
= 
en_US 
.UTF 
-8 
;LC_NUMERIC 
= 
C 
;LC_TIME 
= 
en_US 
.UTF 
-8 
;LC_COLLATE 
= 
en_US 
.UTF 
-8 
;LC_MONETARY 
= 
C 
;LC_MESSAGES 
= 
en_US 
.UTF 
-8 
;LC_PAPER 
= 
en_US 
.UTF 
-8 
;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_US.UTF-8;LC_I\
DENTIFICATION=C
attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base
other attached packages:
[1] Biostrings_2.12.1 IRanges_1.2.2     RMySQL_0.7-4       
DBI_0.2-4         RUnit_0.4.22
loaded via a namespace (and not attached):
[1] Biobase_2.4.1 tools_2.9.0
    
    
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