[BioC] GO.db

Heike Pospisil pospisil at zbh.uni-hamburg.de
Fri Jun 20 13:42:29 CEST 2008


Dear Bioconductors,

I am going to use GO annotation libraries. Unfortunately, I did not succed in 
loading the package GO.db. I have got the following error message:

Error in checkDBSCHEMA(dbconn, "GO_DB") :
  invalid DB schema version (found 0.9, expected 1.0)
Error : .onLoad failed in 'loadNamespace' for 'GO.db'
Error: package/namespace load failed for 'GO.db'

Does someone know which package is needed or what is going wrong with my 
libraries? The sessionInfo is given at the end of this email.

Thanks and best wishes,
Heike


#################
sessionInfo()
R version 2.7.0 (2008-04-22)
i686-pc-linux-gnu

locale:
LC_CTYPE=en_US.UTF-8;LC_NUMERIC=C;LC_TIME=en_US.UTF-8;LC_COLLATE=en_US.UTF-8;LC_MONETARY=C;LC_MESSAGES=en_US.UTF-8;LC_PAPER=en_US.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_US.UTF-8;LC_IDENTIFICATION=C

attached base packages:
[1] tools     stats     graphics  grDevices utils     datasets  methods
[8] base

other attached packages:
[1] AnnotationDbi_1.2.2 RSQLite_0.6-9       DBI_0.2-4
[4] Biobase_2.0.1

-- 
Dr. Heike Pospisil      | pospisil at zbh.uni-hamburg.de
University of Hamburg   | Center for Bioinformatics 
Bundesstrasse 43        | 20146 Hamburg, Germany 
phone:+49-40-42838-7303 | fax: +49-40-42838-7312



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