[BioC] intended behavior of plotPCA and AffyBatch objects?

[James W. MacDonald]

Jenny Drnevich wrote:
> Hi Jim,
> 
> I don't mind that plotPCA working with an AffyBatch object previously 
> was an unintended behavior that now has been 'fixed'. At some point, 
> someone needs to change the documentation for class AffyBatch because it 
> still says it extends class exprSet (with a broken link) instead of 
> class eSet.

Fixed in devel.

Best,

Jim


> 
> Cheers,
> Jenny

-- 
James W. MacDonald, M.S.
Biostatistician
Affymetrix and cDNA Microarray Core
University of Michigan Cancer Center
1500 E. Medical Center Drive
7410 CCGC
Ann Arbor MI 48109
734-647-5623


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