[BioC] read a CEL file?
Ben Bolstad
bmb at bmbolstad.com
Fri Apr 13 07:37:06 CEST 2007
If you use ReadAffy() with sd=TRUE then you'll get the STDEV in the se
slot in addition to the intensities in your AffyBatch.
On Thu, 2007-04-12 at 19:21 -0500, Simon Lin wrote:
> There used to be a function in affy called readCelFile, which can read the
> pixel-level STDEV of the intensity measure of each square (probe) on the
> array.
>
> Nowadays it becomes readAffyBatch.
>
> Can we still get the image-level STDEV somehow?
>
> Thanks!
>
> _______________________________________________
> Bioconductor mailing list
> Bioconductor at stat.math.ethz.ch
> https://stat.ethz.ch/mailman/listinfo/bioconductor
> Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor
More information about the Bioconductor
mailing list