[BioC] memory bottleneck on Linux

[Tapan Mehta]

Hello,

I am trying to run a task of 100 CEL files each of 10
MB on Linux based Bewoulf cluster with each node of  4
GB. I am trying to use the mas5 method in the affy
library. However I am unable to finish it gives memory
problems. I am unable to increase the memory as the
function of memory in R is only for Windows( as posted
on the R mailing list). Please could anybody guide me
in this problem? 

Regards,

Tapan Mehta